Amplicon details

Amplicon:

180 bp
1     gaatcctgtt gccggtcttg cgatgattat catataattt ctgttgaatt
51    acgttaagca tgtaataatt aacatgtaat gcatgacgtt atttatgaga
101   tgggttttta tgattagagt cccgcaatta tacatttaat acgcgataga
151   aaacaaaata tagcgcgcaa actaggataa  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
LC171755.1 nt Dual site Gateway binary vector R4p... 12507 bp Dual site Gateway binary vector R4pGWB6413-MD8 QL-ELE-00-007 180 bp View
AM411028.1 emblreltgn Acinetobacter baylyi transgene for ... 11119 bp Acinetobacter baylyi QL-ELE-00-007 180 bp View
LC221311.1 nt Gateway destination donor vector pD... 7224 bp Gateway destination donor vector pDD627-MD8p-Pnos QL-ELE-00-007 180 bp View
LC171756.1 nt Dual site Gateway binary vector R4p... 12558 bp Dual site Gateway binary vector R4pGWB6416-MD8 QL-ELE-00-007 180 bp View
LY624660.1 emblrelpat KR 1020180119170-A/161: PLANT REGUL... 253 bp Agrobacterium tumefaciens QL-ELE-00-007 180 bp View
LC221312.1 nt Gateway destination donor vector pD... 7908 bp Gateway destination donor vector pDD642-MD8-Pnos QL-ELE-00-007 180 bp View
LC171757.1 nt Dual site Gateway binary vector R4p... 12789 bp Dual site Gateway binary vector R4pGWB6419-MD8 QL-ELE-00-007 180 bp View
LC171757.1 nt Dual site Gateway binary vector R4p... 12789 bp Dual site Gateway binary vector R4pGWB6419-MD8 QL-ELE-00-007 180 bp View
LC221313.1 nt Gateway destination donor vector pD... 7908 bp Gateway destination donor vector pDD645-MD8-Pnos QL-ELE-00-007 180 bp View
AY123624.1 emblreltgn Zea mays transgenic Pat (Pat) gene,... 747 bp Zea mays QL-ELE-00-007 180 bp View
LC171758.1 nt Dual site Gateway binary vector R4p... 13065 bp Dual site Gateway binary vector R4pGWB6422-MD8 QL-ELE-00-007 180 bp View
LC171758.1 nt Dual site Gateway binary vector R4p... 13065 bp Dual site Gateway binary vector R4pGWB6422-MD8 QL-ELE-00-007 180 bp View
LC221314.1 nt Gateway destination donor vector pD... 7905 bp Gateway destination donor vector pDD652-MD8-Pnos QL-ELE-00-007 180 bp View
DI402362.1 emblrelpat KR 1020140035998-A/15: RABIES VIRUS... 6861 bp synthetic construct QL-ELE-00-007 180 bp View
LC171759.1 nt Dual site Gateway binary vector R4p... 12420 bp Dual site Gateway binary vector R4pGWB6425-MD8 QL-ELE-00-007 180 bp View
LC171759.1 nt Dual site Gateway binary vector R4p... 12420 bp Dual site Gateway binary vector R4pGWB6425-MD8 QL-ELE-00-007 180 bp View
LC221315.1 nt Gateway destination donor vector pD... 7866 bp Gateway destination donor vector pDD655-MD8-Pnos QL-ELE-00-007 180 bp View
LC221316.1 nt Gateway destination donor vector pD... 7902 bp Gateway destination donor vector pDD661-MD8-Pnos QL-ELE-00-007 180 bp View
LC171760.1 nt Dual site Gateway binary vector R4p... 14199 bp Dual site Gateway binary vector R4pGWB6433-MD8 QL-ELE-00-007 180 bp View
LC171760.1 nt Dual site Gateway binary vector R4p... 14199 bp Dual site Gateway binary vector R4pGWB6433-MD8 QL-ELE-00-007 180 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.