Amplicon details

Amplicon:

180 bp
1     gaatcctgtt gccggtcttg cgatgattat catataattt ctgttgaatt
51    acgttaagca tgtaataatt aacatgtaat gcatgacgtt atttatgaga
101   tgggttttta tgattagagt cccgcaatta tacatttaat acgcgataga
151   aaacaaaata tagcgcgcaa actaggataa  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
LC171748.1 nt Gateway destination donor vector R4... 7610 bp Gateway destination donor vector R4pDD659-MD8 QL-ELE-00-007 180 bp View
LY531919.1 emblrelpat KR 1020170104595-A/53: ROTAVIRUS-LI... 2277 bp synthetic construct QL-ELE-00-007 180 bp View
GZ274351.1 emblrelpat Sequence 76 from patent US 8163979. 2220 bp unidentified QL-ELE-00-007 180 bp View
LC171750.1 nt Gateway destination donor vector R4... 7097 bp Gateway destination donor vector R4pDD600-MD8-CY2 QL-ELE-00-007 180 bp View
LC221306.1 nt Gateway destination donor vector pD... 7215 bp Gateway destination donor vector pDD612-MD8-Pnos QL-ELE-00-007 180 bp View
HI578419.1 emblrelpat Sequence 35 from Patent WO2010114989. 19472 bp synthetic construct QL-ELE-00-007 180 bp View
LC171751.1 nt Dual site Gateway binary vector R4p... 12387 bp Dual site Gateway binary vector R4pGWB6401-MD8 QL-ELE-00-007 180 bp View
LC171751.1 nt Dual site Gateway binary vector R4p... 12387 bp Dual site Gateway binary vector R4pGWB6401-MD8 QL-ELE-00-007 180 bp View
LC221307.1 nt Gateway destination donor vector pD... 7311 bp Gateway destination donor vector pDD615-MD8-Pnos QL-ELE-00-007 180 bp View
LC221308.1 nt Gateway destination donor vector pD... 7362 bp Gateway destination donor vector pDD618-MD8-Pnos QL-ELE-00-007 180 bp View
LC171752.1 nt Dual site Gateway binary vector R4p... 13116 bp Dual site Gateway binary vector R4pGWB6404-MD8 QL-ELE-00-007 180 bp View
LC171752.1 nt Dual site Gateway binary vector R4p... 13116 bp Dual site Gateway binary vector R4pGWB6404-MD8 QL-ELE-00-007 180 bp View
AF465641.1 emblreltgn Glycine max transgenic Agrobacteriu... 252 bp Glycine max QL-ELE-00-007 180 bp View
LC171753.1 nt Dual site Gateway binary vector R4p... 12405 bp Dual site Gateway binary vector R4pGWB6407-MD8 QL-ELE-00-007 180 bp View
LC171753.1 nt Dual site Gateway binary vector R4p... 12405 bp Dual site Gateway binary vector R4pGWB6407-MD8 QL-ELE-00-007 180 bp View
LC221309.1 nt Gateway destination donor vector pD... 7596 bp Gateway destination donor vector pDD621-MD8-Pnos QL-ELE-00-007 180 bp View
LC171754.1 nt Dual site Gateway binary vector R4p... 12411 bp Dual site Gateway binary vector R4pGWB6410-MD8 QL-ELE-00-007 180 bp View
LC171754.1 nt Dual site Gateway binary vector R4p... 12411 bp Dual site Gateway binary vector R4pGWB6410-MD8 QL-ELE-00-007 180 bp View
DI402361.1 emblrelpat KR 1020140035998-A/13: RABIES VIRUS... 3330 bp synthetic construct QL-ELE-00-007 180 bp View
LC221310.1 nt Gateway destination donor vector pD... 7869 bp Gateway destination donor vector pDD624-MD8-Pnos QL-ELE-00-007 180 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.