Amplicon details

Amplicon:

180 bp
1     gaatcctgtt gccggtcttg cgatgattat catataattt ctgttgaatt
51    acgttaagca tgtaataatt aacatgtaat gcatgacgtt atttatgaga
101   tgggttttta tgattagagt cccgcaatta tacatttaat acgcgataga
151   aaacaaaata tagcgcgcaa actaggataa  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
JD589756.1 emblrelpat Sequence 53 from Patent WO2015017510. 9266 bp synthetic construct QL-ELE-00-007 180 bp View
DI157639.1 emblrelpat Corn event MIR604. 323 bp unidentified QL-ELE-00-007 180 bp View
OQ859100.1 nt Synthetic construct Mla7 native con... 15875 bp synthetic construct QL-ELE-00-007 180 bp View
MN508834.1 nt Binary vector pRATIO3212-SMXL7, com... 14584 bp Binary vector pRATIO3212-SMXL7 QL-ELE-00-007 180 bp View
JD591209.1 emblrelpat Sequence 30 from Patent EP2820132. 13702 bp synthetic construct QL-ELE-00-007 180 bp View
GZ245646.1 emblrelpat Sequence 57 from patent US 8153859. 7841 bp unidentified QL-ELE-00-007 180 bp View
KY464890.1 nt Nicotiana benthamiana transgenic Np... 9484 bp Nicotiana benthamiana QL-ELE-00-007 180 bp View
KY464890.1 nt Nicotiana benthamiana transgenic Np... 9484 bp Nicotiana benthamiana QL-ELE-00-007 180 bp View
LY536289.1 emblrelpat KR 1020170116124-A/4: HERBICIDE RES... 253 bp Agrobacterium tumefaciens QL-ELE-00-007 180 bp View
LT724966.1 nt Gateway expression vector pAGRIKOLA... 9545 bp Gateway expression vector pAGRIKOLA-CATMA2a01160 QL-ELE-00-007 180 bp View
JE966372.1 emblrelpat Sequence 32 from Patent EP2861737. 497 bp synthetic construct QL-ELE-00-007 180 bp View
Y18556.1 nt Cloning vector pSLJ8313, T-DNA region 22574 bp Cloning vector pSLJ8313 QL-ELE-00-007 180 bp View
JE972241.1 emblrelpat Sequence 8 from Patent EP2860254. 13268 bp synthetic construct QL-ELE-00-007 180 bp View
GZ245650.1 emblrelpat Sequence 61 from patent US 8153859. 7847 bp unidentified QL-ELE-00-007 180 bp View
AJ311874.1 nt Cloning vector pHELLSGATE 18691 bp Cloning vector pHELLSGATE QL-ELE-00-007 180 bp View
HI578418.1 emblrelpat Sequence 34 from Patent WO2010114989. 11480 bp synthetic construct QL-ELE-00-007 180 bp View
AF489904.1 nt Cloning vector pHellsgate 8, comple... 17485 bp Cloning vector pHellsgate 8 QL-ELE-00-007 180 bp View
KX011462.1 nt Cloning vector pRESC5GGPPS, complet... 11150 bp Cloning vector pRESC5GGPPS QL-ELE-00-007 180 bp View
MN508836.1 nt Binary vector pRATIO2251-SMAX1D2, c... 14504 bp Binary vector pRATIO2251-SMAX1D2 QL-ELE-00-007 180 bp View
KX011463.1 nt Cloning vector pRESC5AOC, complete ... 11027 bp Cloning vector pRESC5AOC QL-ELE-00-007 180 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.