Amplicon details

Amplicon:

180 bp
1     gaatcctgtt gccggtcttg cgatgattat catataattt ctgttgaatt
51    acgttaagca tgtaataatt aacatgtaat gcatgacgtt atttatgaga
101   tgggttttta tgattagagt cccgcaatta tacatttaat acgcgataga
151   aaacaaaata tagcgcgcaa actaggataa  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
LT725598.1 nt Gateway expression vector pAGRIKOLA... 9821 bp Gateway expression vector pAGRIKOLA-CATMA5a44746 QL-ELE-00-007 180 bp View
LC094308.1 nt Gateway recycling vector pRED56-MD8... 8696 bp Gateway recycling vector pRED56-MD8-Pnos-54 QL-ELE-00-007 180 bp View
LC506530.1 nt Plant binary vector pLC31GWH DNA, c... 14192 bp Plant binary vector pLC31GWH QL-ELE-00-007 180 bp View
LC094309.1 nt Gateway recycling vector pRED56-MD8... 8695 bp Gateway recycling vector pRED56-MD8-Pnos-55 QL-ELE-00-007 180 bp View
LT725599.1 nt Gateway expression vector pAGRIKOLA... 9751 bp Gateway expression vector pAGRIKOLA-CATMA5a45320 QL-ELE-00-007 180 bp View
LC094310.1 nt Gateway recycling vector pRED56-MD8... 8447 bp Gateway recycling vector pRED56-MD8-59 QL-ELE-00-007 180 bp View
LQ019679.1 emblrelpat Sequence 49 from Patent EP2970368. 253 bp Agrobacterium tumefaciens QL-ELE-00-007 180 bp View
LC094311.1 nt Gateway recycling vector pRED56-MD8... 8732 bp Gateway recycling vector pRED56-MD8-Pnos-60 QL-ELE-00-007 180 bp View
MN043927.1 nt Cloning vector pFLHD, complete sequ... 9460 bp Cloning vector pFLHD QL-ELE-00-007 180 bp View
LC094312.1 nt Gateway recycling vector pRED56-MD8... 8731 bp Gateway recycling vector pRED56-MD8-Pnos-61 QL-ELE-00-007 180 bp View
LT725601.1 nt Gateway expression vector pAGRIKOLA... 9467 bp Gateway expression vector pAGRIKOLA-CATMA5a47710 QL-ELE-00-007 180 bp View
LC094313.1 nt Gateway recycling vector pRED56-MD8... 8258 bp Gateway recycling vector pRED56-MD8-NY2 QL-ELE-00-007 180 bp View
HI578415.1 emblrelpat Sequence 31 from Patent WO2010114989. 11721 bp synthetic construct QL-ELE-00-007 180 bp View
LC094314.1 nt Gateway recycling vector pRED56-MD8... 7934 bp Gateway recycling vector pRED56-MD8-CY2 QL-ELE-00-007 180 bp View
LT725602.1 nt Gateway expression vector pAGRIKOLA... 9651 bp Gateway expression vector pAGRIKOLA-CATMA5a47720 QL-ELE-00-007 180 bp View
MN043929.1 nt Cloning vector pFLP19, complete seq... 5256 bp Cloning vector pFLP19 QL-ELE-00-007 180 bp View
LC094316.1 nt Gateway recycling vector pRED56-MD8... 8219 bp Gateway recycling vector pRED56-MD8-Pnos-CY2 QL-ELE-00-007 180 bp View
LT725603.1 nt Gateway expression vector pAGRIKOLA... 9527 bp Gateway expression vector pAGRIKOLA-CATMA5a47930 QL-ELE-00-007 180 bp View
LC094317.1 nt Gateway recycling vector pRED56-MD8... 8542 bp Gateway recycling vector pRED56-MD8-Pnos-NY0 QL-ELE-00-007 180 bp View
GY669288.1 emblrelpat Sequence 156 from patent US 8071749. 8986 bp unidentified QL-ELE-00-007 180 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.