Amplicon details

Amplicon:

180 bp
1     gaatcctgtt gccggtcttg cgatgattat catataattt ctgttgaatt
51    acgttaagca tgtaataatt aacatgtaat gcatgacgtt atttatgaga
101   tgggttttta tgattagagt cccgcaatta tacatttaat acgcgataga
151   aaacaaaata tagcgcgcaa actaggataa  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
LC094277.1 nt Gateway recycling vector pRED56-MD8... 8038 bp Gateway recycling vector pRED56-MD8-Pnos-09 QL-ELE-00-007 180 bp View
AP019390.1 nt Gateway binary vector pB4nVGW3 DNA,... 12317 bp Gateway binary vector pB4nVGW3 QL-ELE-00-007 180 bp View
LC094278.1 nt Gateway recycling vector pRED56-MD8... 7757 bp Gateway recycling vector pRED56-MD8-10 QL-ELE-00-007 180 bp View
LT725583.1 nt Gateway expression vector pAGRIKOLA... 9595 bp Gateway expression vector pAGRIKOLA-CATMA5a42340 QL-ELE-00-007 180 bp View
LC094279.1 nt Gateway recycling vector pRED56-MD8... 8042 bp Gateway recycling vector pRED56-MD8-Pnos-11 QL-ELE-00-007 180 bp View
AP019390.1 nt Gateway binary vector pB4nVGW3 DNA,... 12317 bp Gateway binary vector pB4nVGW3 QL-ELE-00-007 180 bp View
LT725584.1 nt Gateway expression vector pAGRIKOLA... 9607 bp Gateway expression vector pAGRIKOLA-CATMA5a42350 QL-ELE-00-007 180 bp View
LC094280.1 nt Gateway recycling vector pRED56-MD8... 8044 bp Gateway recycling vector pRED56-MD8-Pnos-12 QL-ELE-00-007 180 bp View
LP837481.1 emblrelpat Sequence 33 from Patent WO2017186550. 294 bp Agrobacterium tumefaciens QL-ELE-00-007 180 bp View
LC094281.1 nt Gateway recycling vector pRED56-MD8... 7853 bp Gateway recycling vector pRED56-MD8-13 QL-ELE-00-007 180 bp View
LT725585.1 nt Gateway expression vector pAGRIKOLA... 9523 bp Gateway expression vector pAGRIKOLA-CATMA5a42635 QL-ELE-00-007 180 bp View
LC094282.1 nt Gateway recycling vector pRED56-MD8... 8138 bp Gateway recycling vector pRED56-MD8-Pnos-14 QL-ELE-00-007 180 bp View
HW801748.1 emblrelpat JP 2014530006-A/38: Increasing Viru... 3465 bp synthetic construct QL-ELE-00-007 180 bp View
LC094283.1 nt Gateway recycling vector pRED56-MD8... 8140 bp Gateway recycling vector pRED56-MD8-Pnos-15 QL-ELE-00-007 180 bp View
LT725586.1 nt Gateway expression vector pAGRIKOLA... 9475 bp Gateway expression vector pAGRIKOLA-CATMA5a42700 QL-ELE-00-007 180 bp View
LC094284.1 nt Gateway recycling vector pRED56-MD8... 7889 bp Gateway recycling vector pRED56-MD8-16 QL-ELE-00-007 180 bp View
AP019391.1 nt Gateway binary vector pB4cVGW DNA, ... 11774 bp Gateway binary vector pB4cVGW QL-ELE-00-007 180 bp View
LT725587.1 nt Gateway expression vector pAGRIKOLA... 9529 bp Gateway expression vector pAGRIKOLA-CATMA5a42770 QL-ELE-00-007 180 bp View
AP019391.1 nt Gateway binary vector pB4cVGW DNA, ... 11774 bp Gateway binary vector pB4cVGW QL-ELE-00-007 180 bp View
LC094286.1 nt Gateway recycling vector pRED56-MD8... 8191 bp Gateway recycling vector pRED56-MD8-Pnos-18 QL-ELE-00-007 180 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.