Amplicon details

Amplicon:

180 bp
1     gaatcctgtt gccggtcttg cgatgattat catataattt ctgttgaatt
51    acgttaagca tgtaataatt aacatgtaat gcatgacgtt atttatgaga
101   tgggttttta tgattagagt cccgcaatta tacatttaat acgcgataga
151   aaacaaaata tagcgcgcaa actaggataa  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
MN728544.1 nt Cloning vector pRTL, complete sequence. 4783 bp Cloning vector pRTL QL-ELE-00-007 180 bp View
LC057588.1 nt Binary vector pMpGWB435 DNA, comple... 12528 bp Binary vector pMpGWB435 QL-ELE-00-007 180 bp View
LT725571.1 nt Gateway expression vector pAGRIKOLA... 9617 bp Gateway expression vector pAGRIKOLA-CATMA5a38880 QL-ELE-00-007 180 bp View
LC057589.1 nt Binary vector pMpGWB436 DNA, comple... 13422 bp Binary vector pMpGWB436 QL-ELE-00-007 180 bp View
JB866052.1 emblrelpat Sequence 366 from Patent EP2620501. 9124 bp synthetic construct QL-ELE-00-007 180 bp View
JB866055.1 emblrelpat Sequence 369 from Patent EP2620501. 8206 bp synthetic construct QL-ELE-00-007 180 bp View
JB866058.1 emblrelpat Sequence 372 from Patent EP2620501. 8092 bp synthetic construct QL-ELE-00-007 180 bp View
JB866061.1 emblrelpat Sequence 375 from Patent EP2620501. 8674 bp synthetic construct QL-ELE-00-007 180 bp View
HI578414.1 emblrelpat Sequence 30 from Patent WO2010114989. 10528 bp synthetic construct QL-ELE-00-007 180 bp View
LT724960.1 nt Gateway expression vector pAGRIKOLA... 9439 bp Gateway expression vector pAGRIKOLA-CATMA2a01060 QL-ELE-00-007 180 bp View
JB866095.1 emblrelpat Sequence 34 from Patent EP2620502. 20082 bp synthetic construct QL-ELE-00-007 180 bp View
JB866124.1 emblrelpat Sequence 63 from Patent EP2620502. 12055 bp synthetic construct QL-ELE-00-007 180 bp View
JB866161.1 emblrelpat Sequence 100 from Patent EP2620502. 8641 bp synthetic construct QL-ELE-00-007 180 bp View
LT725572.1 nt Gateway expression vector pAGRIKOLA... 9697 bp Gateway expression vector pAGRIKOLA-CATMA5a39100 QL-ELE-00-007 180 bp View
LC090756.1 nt Binary vector pMpGE010 DNA, complet... 17673 bp Binary vector pMpGE010 QL-ELE-00-007 180 bp View
MN728546.1 nt Cloning vector pSMXL6-LUC, complete... 7573 bp Cloning vector pSMXL6-LUC QL-ELE-00-007 180 bp View
LC090757.1 nt Binary vector pMpGE011 DNA, complet... 18684 bp Binary vector pMpGE011 QL-ELE-00-007 180 bp View
LP631771.1 emblrelpat Sequence 10 from Patent EP2838996. 253 bp Agrobacterium tumefaciens QL-ELE-00-007 180 bp View
JB866341.1 emblrelpat Sequence 280 from Patent EP2620502. 8674 bp synthetic construct QL-ELE-00-007 180 bp View
JB866350.1 emblrelpat Sequence 289 from Patent EP2620502. 8677 bp synthetic construct QL-ELE-00-007 180 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.