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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 180 bp 
1     gaatcctgtt gccggtcttg cgatgattat catataattt ctgttgaatt
51    acgttaagca tgtaataatt aacatgtaat gcatgacgtt atttatgaga
101   tgggttttta tgattagagt cccgcaatta tacatttaat acgcgataga
151   aaacaaaata tagcgcgcaa actaggataa

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
MN187567.1 nt Cloning vector pEAQ-SPHTRgw, comple... 12446 bp Cloning vector pEAQ-SPHTRgw QL-ELE-00-007 180 bp View
LC057487.1 nt Binary vector pMpGWB208 DNA, comple... 13243 bp Binary vector pMpGWB208 QL-ELE-00-007 180 bp View
LC057488.1 nt Binary vector pMpGWB209 DNA, comple... 10793 bp Binary vector pMpGWB209 QL-ELE-00-007 180 bp View
LT725523.1 nt Gateway expression vector pAGRIKOLA... 9807 bp Gateway expression vector pAGRIKOLA-CATMA5a10030 QL-ELE-00-007 180 bp View
LC057489.1 nt Binary vector pMpGWB210 DNA, comple... 12527 bp Binary vector pMpGWB210 QL-ELE-00-007 180 bp View
LF947731.1 emblrelpat JP 2016214183-A/12: Producing metho... 836 bp Streptomyces hygroscopicus QL-ELE-00-007 180 bp View
LC057491.1 nt Binary vector pMpGWB212 DNA, comple... 11600 bp Binary vector pMpGWB212 QL-ELE-00-007 180 bp View
LT725524.1 nt Gateway expression vector pAGRIKOLA... 9935 bp Gateway expression vector pAGRIKOLA-CATMA5a10270 QL-ELE-00-007 180 bp View
LC057492.1 nt Binary vector pMpGWB213 DNA, comple... 13334 bp Binary vector pMpGWB213 QL-ELE-00-007 180 bp View
JB865386.1 emblrelpat Sequence 75 from Patent EP2620500. 11693 bp synthetic construct QL-ELE-00-007 180 bp View
GY216613.1 emblrelpat Sequence 52 from patent US 7951991. 5668 bp unidentified QL-ELE-00-007 180 bp View
JB865410.1 emblrelpat Sequence 99 from Patent EP2620500. 8641 bp synthetic construct QL-ELE-00-007 180 bp View
LC057494.1 nt Binary vector pMpGWB215 DNA, comple... 11477 bp Binary vector pMpGWB215 QL-ELE-00-007 180 bp View
LT725525.1 nt Gateway expression vector pAGRIKOLA... 9449 bp Gateway expression vector pAGRIKOLA-CATMA5a10360 QL-ELE-00-007 180 bp View
LC057495.1 nt Binary vector pMpGWB216 DNA, comple... 12188 bp Binary vector pMpGWB216 QL-ELE-00-007 180 bp View
MN187568.1 nt Cloning vector pEAQ-SPTRgw, complet... 12428 bp Cloning vector pEAQ-SPTRgw QL-ELE-00-007 180 bp View
LC057496.1 nt Binary vector pMpGWB217 DNA, comple... 10769 bp Binary vector pMpGWB217 QL-ELE-00-007 180 bp View
LT725526.1 nt Gateway expression vector pAGRIKOLA... 9749 bp Gateway expression vector pAGRIKOLA-CATMA5a10970 QL-ELE-00-007 180 bp View
LC057497.1 nt Binary vector pMpGWB218 DNA, comple... 12503 bp Binary vector pMpGWB218 QL-ELE-00-007 180 bp View
MN187568.1 nt Cloning vector pEAQ-SPTRgw, complet... 12428 bp Cloning vector pEAQ-SPTRgw QL-ELE-00-007 180 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.