Amplicon details

Amplicon:

180 bp
1     gaatcctgtt gccggtcttg cgatgattat catataattt ctgttgaatt
51    acgttaagca tgtaataatt aacatgtaat gcatgacgtt atttatgaga
101   tgggttttta tgattagagt cccgcaatta tacatttaat acgcgataga
151   aaacaaaata tagcgcgcaa actaggataa  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
KP844566.1 nt Ti Plasmid Binary Vector pGZ12.0106... 17385 bp Ti plasmid binary vector pGZ12.0106 QL-ELE-00-007 180 bp View
MN187558.1 nt Cloning vector pEAQ-gwTR, complete ... 12363 bp Cloning vector pEAQ-gwTR QL-ELE-00-007 180 bp View
LT725489.1 nt Gateway expression vector pAGRIKOLA... 9447 bp Gateway expression vector pAGRIKOLA-CATMA4c42684 QL-ELE-00-007 180 bp View
KR493382.1 nt GM reference vector pBJGMM001, part... 2368 bp GM reference vector pBJGMM001 QL-ELE-00-007 180 bp View
JB256002.1 emblrelpat Sequence 20 from Patent EP2503873. 17806 bp synthetic construct QL-ELE-00-007 180 bp View
GX606487.1 emblrelpat Sequence 786 from patent US 7799906. 7527 bp unidentified QL-ELE-00-007 180 bp View
KP724690.1 nt Synthetic construct barnase and pho... 6245 bp synthetic construct QL-ELE-00-007 180 bp View
KP724690.1 nt Synthetic construct barnase and pho... 6245 bp synthetic construct QL-ELE-00-007 180 bp View
LT725490.1 nt Gateway expression vector pAGRIKOLA... 9573 bp Gateway expression vector pAGRIKOLA-CATMA4c42699 QL-ELE-00-007 180 bp View
JB318827.1 emblrelpat Sequence 170 from Patent EP2441843. 21767 bp synthetic construct QL-ELE-00-007 180 bp View
JB330160.1 emblrelpat Sequence 67 from Patent EP2441842. 7085 bp synthetic construct QL-ELE-00-007 180 bp View
LF387590.1 emblrelpat JP 2014509866-A/161: PLANT REGULATO... 253 bp Agrobacterium tumefaciens QL-ELE-00-007 180 bp View
LT725491.1 nt Gateway expression vector pAGRIKOLA... 9759 bp Gateway expression vector pAGRIKOLA-CATMA5a00810 QL-ELE-00-007 180 bp View
MN187559.1 nt Cloning vector pEAQ-gwTRH, complete... 12387 bp Cloning vector pEAQ-gwTRH QL-ELE-00-007 180 bp View
CP119539.1 nt Agrobacterium fabrum strain 1D1487 ... 214233 bp Agrobacterium fabrum QL-ELE-00-007 180 bp View
LT724958.1 nt Gateway expression vector pAGRIKOLA... 9533 bp Gateway expression vector pAGRIKOLA-CATMA2a01040 QL-ELE-00-007 180 bp View
MN187559.1 nt Cloning vector pEAQ-gwTRH, complete... 12387 bp Cloning vector pEAQ-gwTRH QL-ELE-00-007 180 bp View
LT724959.1 nt Gateway expression vector pAGRIKOLA... 9913 bp Gateway expression vector pAGRIKOLA-CATMA2a01050 QL-ELE-00-007 180 bp View
OP013018.1 nt Synthetic construct clone pEnEOimsf... 6328 bp synthetic construct QL-ELE-00-007 180 bp View
LT725493.1 nt Gateway expression vector pAGRIKOLA... 9663 bp Gateway expression vector pAGRIKOLA-CATMA5a00970 QL-ELE-00-007 180 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.