Amplicon details

Amplicon:

180 bp
1     gaatcctgtt gccggtcttg cgatgattat catataattt ctgttgaatt
51    acgttaagca tgtaataatt aacatgtaat gcatgacgtt atttatgaga
101   tgggttttta tgattagagt cccgcaatta tacatttaat acgcgataga
151   aaacaaaata tagcgcgcaa actaggataa  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
DD141275.1 emblrelpat CHROMOSOME-BASED PLATFORMS. 277 bp synthetic construct QL-ELE-00-006 180 bp View
JC271931.1 emblrelpat Sequence 75 from Patent EP2683799. 17309 bp synthetic construct QL-ELE-00-006 180 bp View
JC271931.1 emblrelpat Sequence 75 from Patent EP2683799. 17309 bp synthetic construct QL-ELE-00-006 180 bp View
JC271931.1 emblrelpat Sequence 75 from Patent EP2683799. 17309 bp synthetic construct QL-ELE-00-006 180 bp View
CQ792312.1 emblrelpat Sequence 57 from Patent WO2004020642. 6423 bp synthetic construct QL-ELE-00-006 180 bp View
AX025617.1 emblrelpat Sequence 17 from Patent WO0029592. 4299 bp synthetic construct QL-ELE-00-006 180 bp View
JC271932.1 emblrelpat Sequence 76 from Patent EP2683799. 13042 bp synthetic construct QL-ELE-00-006 180 bp View
JC271932.1 emblrelpat Sequence 76 from Patent EP2683799. 13042 bp synthetic construct QL-ELE-00-006 180 bp View
DD141278.1 emblrelpat CHROMOSOME-BASED PLATFORMS. 3451 bp synthetic construct QL-ELE-00-006 180 bp View
CQ792313.1 emblrelpat Sequence 58 from Patent WO2004020642. 5715 bp synthetic construct QL-ELE-00-006 180 bp View
JC271933.1 emblrelpat Sequence 77 from Patent EP2683799. 13120 bp synthetic construct QL-ELE-00-006 180 bp View
JC271933.1 emblrelpat Sequence 77 from Patent EP2683799. 13120 bp synthetic construct QL-ELE-00-006 180 bp View
DD141279.1 emblrelpat CHROMOSOME-BASED PLATFORMS. 14627 bp synthetic construct QL-ELE-00-006 180 bp View
HV302694.1 emblrelpat JP 2009254382-A/17: Plant Artificia... 277 bp synthetic construct QL-ELE-00-006 180 bp View
JC271934.1 emblrelpat Sequence 78 from Patent EP2683799. 17111 bp synthetic construct QL-ELE-00-006 180 bp View
JC271934.1 emblrelpat Sequence 78 from Patent EP2683799. 17111 bp synthetic construct QL-ELE-00-006 180 bp View
DD159733.1 emblrelpat A solely pollen-specific promoter. 2709 bp synthetic construct QL-ELE-00-006 180 bp View
HV576887.1 emblrelpat JP 2010524474-A/8: Manipulation of ... 10786 bp synthetic construct QL-ELE-00-006 180 bp View
HL831192.1 emblrelpat Sequence 52 from patent US 9347046. 11208 bp unidentified QL-ELE-00-006 180 bp View
JC271935.1 emblrelpat Sequence 79 from Patent EP2683799. 12892 bp synthetic construct QL-ELE-00-006 180 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.