Amplicon details

Amplicon:

180 bp
1     gaatcctgtt gccggtcttg cgatgattat catataattt ctgttgaatt
51    acgttaagca tgtaataatt aacatgtaat gcatgacgtt atttatgaga
101   tgggttttta tgattagagt cccgcaatta tacatttaat acgcgataga
151   aaacaaaata tagcgcgcaa actaggataa  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
MT024588.1 nt Binary vector pRATIO3212, complete ... 13281 bp Binary vector pRATIO3212 QL-ELE-00-006 180 bp View
MT024576.1 nt Binary vector pRATIO2251, complete ... 14971 bp Binary vector pRATIO2251 QL-ELE-00-006 180 bp View
AB691959.1 nt Gateway binary vector R4L1pGWB650 D... 11404 bp Gateway binary vector R4L1pGWB650 QL-ELE-00-006 180 bp View
AB691967.1 nt Gateway binary vector R4L1pGWB759 D... 12023 bp Gateway binary vector R4L1pGWB759 QL-ELE-00-006 180 bp View
AB684626.1 nt Cloning vector pSolycp00001 DNA, co... 11143 bp Cloning vector pSolycp00001 QL-ELE-00-006 180 bp View
JQ436738.1 nt Binary vector pVCPGUS(I)23010, comp... 14317 bp Binary vector pVCPGUS(I)23010 QL-ELE-00-006 180 bp View
JQ655420.1 nt Cloning vector pUAS:uidA, complete ... 10862 bp Cloning vector pUAS:uidA QL-ELE-00-006 180 bp View
KC294597.1 nt Expression vector SUPERR_XVE_GFPc, ... 4497 bp Expression vector SUPERR_XVE_GFPc QL-ELE-00-006 180 bp View
AB752375.1 nt Gateway binary vector pGWB480omega ... 12333 bp Gateway binary vector pGWB480omega QL-ELE-00-006 180 bp View
KC294589.1 nt Expression vector P16woS_XVE_GFPn, ... 3832 bp Expression vector P16woS_XVE_GFPn QL-ELE-00-006 180 bp View
MW701371.1 nt Synthetic construct ASFV-G-deltaI17... 180831 bp synthetic construct QL-ELE-00-006 180 bp View
MW289819.1 nt Transformation vector pGoldenGreenG... 14901 bp Transformation vector pGoldenGreenGate QL-ELE-00-006 180 bp View
KF148031.1 nt Ti binary plasmid pGH00.0131, compl... 18018 bp Ti binary plasmid pGH00.0131 QL-ELE-00-006 180 bp View
MT362436.1 nt Binary vector pGC13.0117_TcBBM, com... 20124 bp Binary vector pGC13.0117_TcBBM QL-ELE-00-006 180 bp View
MN856142.1 nt Ti plasmid binary vector pGSh17.040... 16189 bp Ti plasmid binary vector pGSh17.0404 QL-ELE-00-006 180 bp View
KF876800.1 nt Binary vector pYBA-1136, complete s... 6557 bp Binary vector pYBA-1136 QL-ELE-00-006 180 bp View
KF876817.1 nt Binary vector pYBA-1127, complete s... 6133 bp Binary vector pYBA-1127 QL-ELE-00-006 180 bp View
MW026670.1 nt Plant expression vector pZG160, com... 12388 bp Plant expression vector pZG160 QL-ELE-00-006 180 bp View
MW026674.1 nt Plant expression vector pZG164, com... 14050 bp Plant expression vector pZG164 QL-ELE-00-006 180 bp View
KC920578.1 nt Binary vector pFGUS2b, complete seq... 10970 bp Binary vector pFGUS2b QL-ELE-00-006 180 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.