Amplicon details

Amplicon:

180 bp
1     gaatcctgtt gccggtcttg cgatgattat catataattt ctgttgaatt
51    acgttaagca tgtaataatt aacatgtaat gcatgacgtt atttatgaga
101   tgggttttta tgattagagt cccgcaatta tacatttaat acgcgataga
151   aaacaaaata tagcgcgcaa actaggataa  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
AB543120.1 nt Gateway binary vector pGWB611 DNA, ... 11565 bp Gateway binary vector pGWB611 QL-ELE-00-006 180 bp View
AB543129.1 nt Gateway binary vector pGWB620 DNA, ... 11943 bp Gateway binary vector pGWB620 QL-ELE-00-006 180 bp View
AB543138.1 nt Gateway binary vector pGWB629 DNA, ... 12087 bp Gateway binary vector pGWB629 QL-ELE-00-006 180 bp View
AB543139.1 nt Gateway binary vector pGWB633 DNA, ... 12497 bp Gateway binary vector pGWB633 QL-ELE-00-006 180 bp View
AB543143.1 nt Gateway binary vector pGWB642 DNA, ... 12260 bp Gateway binary vector pGWB642 QL-ELE-00-006 180 bp View
AB543144.1 nt Gateway binary vector pGWB643 DNA, ... 11402 bp Gateway binary vector pGWB643 QL-ELE-00-006 180 bp View
AB543152.1 nt Gateway binary vector pGWB655 DNA, ... 12218 bp Gateway binary vector pGWB655 QL-ELE-00-006 180 bp View
AB543153.1 nt Gateway binary vector pGWB659 DNA, ... 11414 bp Gateway binary vector pGWB659 QL-ELE-00-006 180 bp View
AB543158.1 nt Gateway binary vector R4pGWB607 DNA... 10709 bp Gateway binary vector R4pGWB607 QL-ELE-00-006 180 bp View
AB543162.1 nt Gateway binary vector R4pGWB619 DNA... 11093 bp Gateway binary vector R4pGWB619 QL-ELE-00-006 180 bp View
AB543165.1 nt Gateway binary vector R4pGWB628 DNA... 11237 bp Gateway binary vector R4pGWB628 QL-ELE-00-006 180 bp View
AB543171.1 nt Gateway binary vector R4pGWB653 DNA... 11369 bp Gateway binary vector R4pGWB653 QL-ELE-00-006 180 bp View
AB543173.1 nt Gateway binary vector pGWB459 DNA, ... 11558 bp Gateway binary vector pGWB459 QL-ELE-00-006 180 bp View
AB543174.1 nt Gateway binary vector pGWB460 DNA, ... 12399 bp Gateway binary vector pGWB460 QL-ELE-00-006 180 bp View
GU982971.1 nt Binary vector pBIB-KAN, complete se... 12703 bp Binary vector pBIB-KAN QL-ELE-00-006 180 bp View
GU947643.1 nt Binary vector pBrachyTAG-G218, comp... 9009 bp Binary vector pBrachyTAG-G218 QL-ELE-00-006 180 bp View
GU947644.1 nt Binary vector pBrachyTAG-G217, comp... 6855 bp Binary vector pBrachyTAG-G217 QL-ELE-00-006 180 bp View
GQ870263.1 nt Plant RNAi vector pRNAi-LIC, comple... 12097 bp Plant RNAi vector pRNAi-LIC QL-ELE-00-006 180 bp View
EU363768.1 nt Zea mays Bt10 transgenic insert. 1745 bp Zea mays QL-ELE-00-006 180 bp View
AB608276.1 nt Gateway binary vector pGWB710 DNA, ... 11346 bp Gateway binary vector pGWB710 QL-ELE-00-006 180 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.