Amplicon details

Amplicon:

180 bp
1     gaatcctgtt gccggtcttg cgatgattat catataattt ctgttgaatt
51    acgttaagca tgtaataatt aacatgtaat gcatgacgtt atttatgaga
101   tgggttttta tgattagagt cccgcaatta tacatttaat acgcgataga
151   aaacaaaata tagcgcgcaa actaggataa  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
AB289802.1 nt Gateway binary vector pGWB228 DNA, ... 16383 bp Gateway binary vector pGWB228 QL-ELE-00-006 180 bp View
AB294481.1 nt Gateway binary vector pGWB514 DNA, ... 12126 bp Gateway binary vector pGWB514 QL-ELE-00-006 180 bp View
AB294484.1 nt Gateway binary vector pGWB517 DNA, ... 12177 bp Gateway binary vector pGWB517 QL-ELE-00-006 180 bp View
AB294486.1 nt Gateway binary vector pGWB519 DNA, ... 11552 bp Gateway binary vector pGWB519 QL-ELE-00-006 180 bp View
AB294488.1 nt Gateway binary vector pGWB521 DNA, ... 12413 bp Gateway binary vector pGWB521 QL-ELE-00-006 180 bp View
AB294489.1 nt Gateway binary vector pGWB522 DNA, ... 11828 bp Gateway binary vector pGWB522 QL-ELE-00-006 180 bp View
AB294491.1 nt Gateway binary vector pGWB524 DNA, ... 12686 bp Gateway binary vector pGWB524 QL-ELE-00-006 180 bp View
AB294499.1 nt Gateway binary vector pGWB540 DNA, ... 11882 bp Gateway binary vector pGWB540 QL-ELE-00-006 180 bp View
AB294501.1 nt Gateway binary vector pGWB542 DNA, ... 12725 bp Gateway binary vector pGWB542 QL-ELE-00-006 180 bp View
AB294502.1 nt Gateway binary vector pGWB543 DNA, ... 11882 bp Gateway binary vector pGWB543 QL-ELE-00-006 180 bp View
AB294504.1 nt Gateway binary vector pGWB545 DNA, ... 12725 bp Gateway binary vector pGWB545 QL-ELE-00-006 180 bp View
AB294425.1 nt Gateway binary vector pGWB401 DNA, ... 10844 bp Gateway binary vector pGWB401 QL-ELE-00-006 180 bp View
AB294426.1 nt Gateway binary vector pGWB402 DNA, ... 11685 bp Gateway binary vector pGWB402 QL-ELE-00-006 180 bp View
AB294430.1 nt Gateway binary vector pGWB406 DNA, ... 12407 bp Gateway binary vector pGWB406 QL-ELE-00-006 180 bp View
AB294436.1 nt Gateway binary vector pGWB412 DNA, ... 11711 bp Gateway binary vector pGWB412 QL-ELE-00-006 180 bp View
AB294442.1 nt Gateway binary vector pGWB418 DNA, ... 11858 bp Gateway binary vector pGWB418 QL-ELE-00-006 180 bp View
AB294448.1 nt Gateway binary vector pGWB424 DNA, ... 12365 bp Gateway binary vector pGWB424 QL-ELE-00-006 180 bp View
AB294458.1 nt Gateway binary vector pGWB442 DNA, ... 12404 bp Gateway binary vector pGWB442 QL-ELE-00-006 180 bp View
AB294464.1 nt Gateway binary vector pGWB452 DNA, ... 12401 bp Gateway binary vector pGWB452 QL-ELE-00-006 180 bp View
AB364169.1 nt Gateway binary vector R4pGWB419 DNA... 11237 bp Gateway binary vector R4pGWB419 QL-ELE-00-006 180 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.