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European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 180 bp 
1     gaatcctgtt gccggtcttg cgatgattat catataattt ctgttgaatt
51    acgttaagca tgtaataatt aacatgtaat gcatgacgtt atttatgaga
101   tgggttttta tgattagagt cccgcaatta tacatttaat acgcgataga
151   aaacaaaata tagcgcgcaa actaggataa

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
AY147202.1 nt Binary vector pGV4939 kanamycin res... 6643 bp Binary vector pGV4939 QL-ELE-00-006 180 bp View
U12639.1 nt GUS gene fusion vector pBI101 T-DNA... 5349 bp Cloning vector pBI101 QL-ELE-00-006 180 bp View
AJ551314.1 nt Transfection vector pBTdest 4462 bp Transfection vector pBTdest QL-ELE-00-006 180 bp View
AY488511.1 nt Gene trapping vector pEU334bn, comp... 21188 bp Gene trapping vector pEU334bn QL-ELE-00-006 180 bp View
AY788908.1 nt N-terminal TAPa T-DNA vector pN-TAP... 12537 bp N-terminal TAPa T-DNA vector pN-TAPa QL-ELE-00-006 180 bp View
DQ225748.1 nt Gene trapping Ds/T-DNA vector pNU39... 19278 bp Gene trapping Ds/T-DNA vector pNU393A1 QL-ELE-00-006 180 bp View
AY178451.1 nt Expression vector pYPX4062, complet... 12563 bp Expression vector pYPX4062 QL-ELE-00-006 180 bp View
AY860535.1 nt Cloning vector p713-1511, complete ... 13907 bp Cloning vector p713-1511 QL-ELE-00-006 180 bp View
AY297843.1 nt Transformation vector pgR106, compl... 10451 bp Transformation vector pgR106 QL-ELE-00-006 180 bp View
AY562539.1 nt Binary Vector pORE_O1, complete seq... 7287 bp Binary vector pORE_O1 QL-ELE-00-006 180 bp View
AY562547.1 nt Binary Vector pORE_R4, complete seq... 7280 bp Binary vector pORE_R4 QL-ELE-00-006 180 bp View
DQ452049.1 nt Binary vector pGPro1, complete sequ... 8833 bp Binary vector pGPro1 QL-ELE-00-006 180 bp View
DQ869006.1 nt Binary vector pMOA35, partial sequence. 2083 bp Binary vector pMOA35 QL-ELE-00-006 180 bp View
DQ666282.1 nt Cloning vector pRGK 366, complete s... 11502 bp Cloning vector pRGK 366 QL-ELE-00-006 180 bp View
DQ666283.1 nt Cloning vector pRGK 367, complete s... 11776 bp Cloning vector pRGK 367 QL-ELE-00-006 180 bp View
DQ658215.1 nt Binary vector pCAMBIA1300-FAD1A, co... 10983 bp Binary vector pCAMBIA1300-FAD1A QL-ELE-00-006 180 bp View
DQ658216.1 nt Binary vector pCAMBIA1300-FAD2A, co... 10407 bp Binary vector pCAMBIA1300-FAD2A QL-ELE-00-006 180 bp View
DQ658217.1 nt Binary vector pCAMBIA1300-FAD2b, co... 10130 bp Binary vector pCAMBIA1300-FAD2b QL-ELE-00-006 180 bp View
AB289764.1 nt Gateway binary vector pGWB1 DNA, co... 16385 bp Gateway binary vector pGWB1 QL-ELE-00-006 180 bp View
AB289764.1 nt Gateway binary vector pGWB1 DNA, co... 16385 bp Gateway binary vector pGWB1 QL-ELE-00-006 180 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.