Amplicon details

Amplicon:

180 bp
1     gaatcctgtt gccggtcttg cgatgattat catataattt ctgttgaatt
51    acgttaagca tgtaataatt aacatgtaat gcatgacgtt atttatgaga
101   tgggttttta tgattagagt cccgcaatta tacatttaat acgcgataga
151   aaacaaaata tagcgcgcaa actaggataa  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
AF502128.1 nt Transient expression vector pBI221,... 5667 bp Transient expression vector pBI221 QL-ELE-00-006 180 bp View
AY860533.1 nt Cloning vector p713-905, complete s... 14999 bp Cloning vector p713-905 QL-ELE-00-006 180 bp View
AY860534.1 nt Cloning vector p713-947, complete s... 14789 bp Cloning vector p713-947 QL-ELE-00-006 180 bp View
AB016260.1 nt Agrobacterium tumefaciens plasmid p... 206479 bp Agrobacterium tumefaciens QL-ELE-00-006 180 bp View
MH373672.1 nt Protoplast Transient Overexpression... 4883 bp Protoplast Transient Overexpression Vector pRTVcGFP QL-ELE-00-006 180 bp View
U09365.1 nt Binary vector Bin19, complete sequence. 11777 bp Binary vector Bin19 QL-ELE-00-006 180 bp View
MH373676.1 nt Protoplast BiFC Vector pRTVnVC, com... 5778 bp Protoplast BiFC Vector pRTVnVC QL-ELE-00-006 180 bp View
DQ005462.1 nt Cloning vector pSAT2A-nosP-MCS-nosT... 3289 bp Cloning vector pSAT2A-nosP-MCS-nosT QL-ELE-00-006 180 bp View
DQ005463.1 nt Cloning vector pSAT2-nosP-MCS-nosT,... 3295 bp Cloning vector pSAT2-nosP-MCS-nosT QL-ELE-00-006 180 bp View
AY297842.1 nt Transformation vector pgR107, compl... 10436 bp Transformation vector pgR107 QL-ELE-00-006 180 bp View
AF406991.1 nt Tobacco rattle virus RNA2-based VIG... 9663 bp Tobacco rattle virus RNA2-based VIGS vector pTRV2 QL-ELE-00-006 180 bp View
AY436765.1 nt Binary vector pAMPAT-MCS, complete ... 5274 bp Binary vector pAMPAT-MCS QL-ELE-00-006 180 bp View
AY373338.1 nt Binary vector pGA1611, complete seq... 13476 bp Binary vector pGA1611 QL-ELE-00-006 180 bp View
AY452736.2 nt Reporter vector pUbiGUSPlus, comple... 7018 bp Reporter vector pUbiGUSPlus QL-ELE-00-006 180 bp View
AY529717.1 nt Cloning vector pADIS1, complete seq... 5106 bp Cloning vector pADIS1 QL-ELE-00-006 180 bp View
AY560325.1 nt Cloning vector pC1300intB-35SnosEX,... 9937 bp Cloning vector pC1300intB-35SnosEX QL-ELE-00-006 180 bp View
MH397715.1 nt Plant Stable Overexpression Vector ... 8822 bp Plant Stable Overexpression Vector pRHVnMyc QL-ELE-00-006 180 bp View
AY560326.1 nt Cloning vector pC1300intB-35SnosBK,... 9946 bp Cloning vector pC1300intB-35SnosBK QL-ELE-00-006 180 bp View
AY562534.1 nt Binary Vector pORE_E1, complete seq... 7785 bp Binary vector pORE_E1 QL-ELE-00-006 180 bp View
AY562534.1 nt Binary Vector pORE_E1, complete seq... 7785 bp Binary vector pORE_E1 QL-ELE-00-006 180 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.