Amplicon details

Amplicon:

180 bp
1     gaatcctgtt gccggtcttg cgatgattat catataattt ctgttgaatt
51    acgttaagca tgtaataatt aacatgtaat gcatgacgtt atttatgaga
101   tgggttttta tgattagagt cccgcaatta tacatttaat acgcgataga
151   aaacaaaata tagcgcgcaa actaggataa  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
OP672271.1 nt Vector PK2-Cas9, complete sequence. 13797 bp Vector PK2-Cas9 QL-ELE-00-006 180 bp View
ON092626.1 nt Moss mCitrine knock-in vector, comp... 6023 bp Moss mCitrine knock-in vector QL-ELE-00-006 180 bp View
ON092627.1 nt Moss mClover3 knock-in vector, comp... 6023 bp Moss mClover3 knock-in vector QL-ELE-00-006 180 bp View
JB223954.1 emblrelpat Sequence 1 from Patent EP2535416. 18723 bp synthetic construct QL-ELE-00-006 180 bp View
JB223955.1 emblrelpat Sequence 2 from Patent EP2535416. 16363 bp synthetic construct QL-ELE-00-006 180 bp View
DI095692.1 emblrelpat METHOD FOR PRODUCING CAROTENOIDS OR... 18449 bp unidentified QL-ELE-00-006 180 bp View
JB223975.1 emblrelpat Sequence 22 from Patent EP2535416. 1773 bp synthetic construct QL-ELE-00-006 180 bp View
LT724957.1 nt Gateway expression vector pAGRIKOLA... 9935 bp Gateway expression vector pAGRIKOLA-CATMA2a01010 QL-ELE-00-006 180 bp View
JB223995.1 emblrelpat Sequence 42 from Patent EP2535416. 702 bp synthetic construct QL-ELE-00-006 180 bp View
OP757693.1 nt Cloning vector pMDC43-VirE2, comple... 11668 bp Cloning vector pMDC43-VirE2 QL-ELE-00-006 180 bp View
OP757694.1 nt Cloning vector TRV2-RNA2-PDS4, comp... 11498 bp Cloning vector TRV2-RNA2-PDS4 QL-ELE-00-006 180 bp View
OP757695.1 nt Cloning vector TRV2-RNA2-PDS1, comp... 11498 bp Cloning vector TRV2-RNA2-PDS1 QL-ELE-00-006 180 bp View
OP757696.1 nt Cloning vector TRV2-RNA2-PDS1-m18, ... 11523 bp Cloning vector TRV2-RNA2-PDS1-m18 QL-ELE-00-006 180 bp View
JB223997.1 emblrelpat Sequence 44 from Patent EP2535416. 5881 bp synthetic construct QL-ELE-00-006 180 bp View
OP757697.1 nt Cloning vector TRV-RNA2-PDS1-s18a27... 11551 bp Cloning vector TRV-RNA2-PDS1-s18a27 QL-ELE-00-006 180 bp View
OP757698.1 nt Cloning vector TRV-RNA2-PDS4-m18a27... 11552 bp Cloning vector TRV-RNA2-PDS4-m18a27 QL-ELE-00-006 180 bp View
OP757699.1 nt Cloning vector TRV-RNA2-PDS1-a27, c... 11527 bp Cloning vector TRV-RNA2-PDS1-a27 QL-ELE-00-006 180 bp View
OP757700.1 nt Cloning vector TRV-RNA2-PDS4-a27, c... 11528 bp Cloning vector TRV-RNA2-PDS4-a27 QL-ELE-00-006 180 bp View
OP757701.1 nt Cloning vector TRV-RNA2-PDS4-m18, c... 11523 bp Cloning vector TRV-RNA2-PDS4-m18 QL-ELE-00-006 180 bp View
JB224001.1 emblrelpat Sequence 48 from Patent EP2535416. 2584 bp synthetic construct QL-ELE-00-006 180 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.