Amplicon details

Amplicon:

180 bp
1     gaatcctgtt gccggtcttg cgatgattat catataattt ctgttgaatt
51    acgttaagca tgtaataatt aacatgtaat gcatgacgtt atttatgaga
101   tgggttttta tgattagagt cccgcaatta tacatttaat acgcgataga
151   aaacaaaata tagcgcgcaa actaggataa  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
JA390618.1 emblrelpat Sequence 1 from Patent WO2011054729. 11149 bp Solanum tuberosum QL-ELE-00-006 180 bp View
JA390619.1 emblrelpat Sequence 2 from Patent WO2011054729. 8706 bp Solanum tuberosum QL-ELE-00-006 180 bp View
JA390632.1 emblrelpat Sequence 15 from Patent WO2011054729. 2254 bp Solanum tuberosum QL-ELE-00-006 180 bp View
JA390634.1 emblrelpat Sequence 17 from Patent WO2011054729. 5212 bp Solanum tuberosum QL-ELE-00-006 180 bp View
JA390664.1 emblrelpat Sequence 47 from Patent WO2011054729. 8768 bp Solanum tuberosum QL-ELE-00-006 180 bp View
JC231821.1 emblrelpat Sequence 25 from Patent WO2013012775. 12453 bp Zea mays QL-ELE-00-006 180 bp View
JC231824.1 emblrelpat Sequence 28 from Patent WO2013012775. 4407 bp Zea mays QL-ELE-00-006 180 bp View
HJ230502.1 emblrelpat Sequence 6 from patent US 8465915. 11588 bp unidentified QL-ELE-00-006 180 bp View
HJ230503.1 emblrelpat Sequence 7 from patent US 8465915. 5583 bp unidentified QL-ELE-00-006 180 bp View
MP019540.1 emblrelpat Sequence 16 from Patent WO2018197878. 7912 bp Hordeum vulgare QL-ELE-00-006 180 bp View
MP019540.1 emblrelpat Sequence 16 from Patent WO2018197878. 7912 bp Hordeum vulgare QL-ELE-00-006 180 bp View
MP305481.1 emblrelpat Sequence 3166 from Patent WO2019086510. 7428 bp Triticum aestivum QL-ELE-00-006 180 bp View
MP305486.1 emblrelpat Sequence 3171 from Patent WO2019086510. 250 bp Triticum aestivum QL-ELE-00-006 180 bp View
MP538370.1 emblrelpat Sequence 1 from Patent EP3619225. 13202 bp Triticum aestivum QL-ELE-00-006 180 bp View
MP538370.1 emblrelpat Sequence 1 from Patent EP3619225. 13202 bp Triticum aestivum QL-ELE-00-006 180 bp View
MS792781.1 emblrelpat Sequence 18 from Patent WO2017025360. 255 bp Arabidopsis thaliana QL-ELE-00-006 180 bp View
A23334.1 emblrelpat PVE108 plasmid DNA 5620 bp Escherichia coli QL-ELE-00-006 180 bp View
A23334.1 emblrelpat PVE108 plasmid DNA 5620 bp Escherichia coli QL-ELE-00-006 180 bp View
CQ894201.1 emblrelpat Sequence 1 from Patent WO2004090160. 1600 bp Escherichia coli QL-ELE-00-006 180 bp View
CS108673.1 emblrelpat Sequence 24 from Patent WO2005052169. 253 bp Agrobacterium sp. QL-ELE-00-006 180 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.