Amplicon details

Amplicon:

180 bp
1     gaatcctgtt gccggtcttg cgatgattat catataattt ctgttgaatt
51    acgttaagca tgtaataatt aacatgtaat gcatgacgtt atttatgaga
101   tgggttttta tgattagagt cccgcaatta tacatttaat acgcgataga
151   aaacaaaata tagcgcgcaa actaggataa  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
KY464890.1 emblreltgn Nicotiana benthamiana transgenic Np... 9484 bp Nicotiana benthamiana QL-ELE-00-006 180 bp View
MN020371.1 emblreltgn Triticum aestivum transgenic MON712... 7729 bp Triticum aestivum QL-ELE-00-006 180 bp View
MN020371.1 emblreltgn Triticum aestivum transgenic MON712... 7729 bp Triticum aestivum QL-ELE-00-006 180 bp View
HC992976.1 emblrelpat Sequence 68242 from Patent EP2199304. 13170 bp unidentified QL-ELE-00-006 180 bp View
LP775045.1 emblrelpat Sequence 35 from Patent WO2018022574. 2442 bp Botrytis cinerea QL-ELE-00-006 180 bp View
HJ186551.1 emblrelpat Sequence 38 from patent US 8344209. 15162 bp unidentified QL-ELE-00-006 180 bp View
HJ187156.1 emblrelpat Sequence 15 from patent US 8455035. 24631 bp unidentified QL-ELE-00-006 180 bp View
HJ192006.1 emblrelpat Sequence 59 from patent US 8455720. 1518 bp unidentified QL-ELE-00-006 180 bp View
HJ221884.1 emblrelpat Sequence 68 from patent US 8399736. 8638 bp unidentified QL-ELE-00-006 180 bp View
HJ221911.1 emblrelpat Sequence 98 from patent US 8399736. 8641 bp unidentified QL-ELE-00-006 180 bp View
A26453.1 emblrelpat Recombinant soya beta-1,3-glucanase... 1829 bp Glycine max QL-ELE-00-006 180 bp View
A32909.1 emblrelpat Chimeric endochitinase gene 1863 bp Nicotiana tabacum QL-ELE-00-006 180 bp View
BD235520.1 emblrelpat JP 2002517984-A/55: Desaturase gene... 6337 bp Zea mays QL-ELE-00-006 180 bp View
BD272357.1 emblrelpat Regulatory sequences useful for gen... 6694 bp Zea mays QL-ELE-00-006 180 bp View
CS079678.1 emblrelpat Sequence 2 from Patent EP1528105. 2709 bp Arabidopsis thaliana QL-ELE-00-006 180 bp View
CS182458.1 emblrelpat Sequence 2 from Patent WO2005097999. 10870 bp Arabidopsis thaliana QL-ELE-00-006 180 bp View
DI157077.1 emblrelpat Corn event MIR604. 1570 bp Zea mays QL-ELE-00-006 180 bp View
DI359070.1 emblrelpat KR 1020130025447-A/4: Corn Event MI... 1570 bp Zea mays QL-ELE-00-006 180 bp View
DI359131.1 emblrelpat KR 1020130023409-A/4: Corn Event MI... 1570 bp Zea mays QL-ELE-00-006 180 bp View
DJ437652.1 emblrelpat Corn Event MIR604. 1570 bp Zea mays QL-ELE-00-006 180 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.