Amplicon details

Amplicon:

180 bp
1     gaatcctgtt gccggtcttg cgatgattat catataattt ctgttgaatt
51    acgttaagca tgtaataatt aacatgtaat gcatgacgtt atttatgaga
101   tgggttttta tgattagagt cccgcaatta tacatttaat acgcgataga
151   aaacaaaata tagcgcgcaa actaggataa  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
HW801724.1 emblrelpat JP 2014530006-A/14: Increasing Viru... 4897 bp synthetic construct QL-ELE-00-006 180 bp View
DD434546.1 emblrelpat ENHANCED ACCUMULATION OF CAROTENOID... 5180 bp unidentified QL-ELE-00-006 180 bp View
DD434549.1 emblrelpat ENHANCED ACCUMULATION OF CAROTENOID... 5714 bp unidentified QL-ELE-00-006 180 bp View
DD434550.1 emblrelpat ENHANCED ACCUMULATION OF CAROTENOID... 5974 bp unidentified QL-ELE-00-006 180 bp View
DD434551.1 emblrelpat ENHANCED ACCUMULATION OF CAROTENOID... 5782 bp unidentified QL-ELE-00-006 180 bp View
DD434566.1 emblrelpat ENHANCED ACCUMULATION OF CAROTENOID... 254 bp unidentified QL-ELE-00-006 180 bp View
DI027679.1 emblrelpat Lipoxygenase Genes, Promoters, Tran... 12817 bp unidentified QL-ELE-00-006 180 bp View
DI085815.1 emblrelpat Cestrum yellow leaf curling virus p... 2943 bp unidentified QL-ELE-00-006 180 bp View
DI095277.1 emblrelpat METHOD FOR PRODUCING CAROTENOIDS OR... 17593 bp unidentified QL-ELE-00-006 180 bp View
EA284478.1 emblrelpat Sequence 50 from patent US 7262338. 1254 bp unidentified QL-ELE-00-006 180 bp View
EA284481.1 emblrelpat Sequence 53 from patent US 7262338. 2138 bp unidentified QL-ELE-00-006 180 bp View
EA284485.1 emblrelpat Sequence 57 from patent US 7262338. 6423 bp unidentified QL-ELE-00-006 180 bp View
EA284487.1 emblrelpat Sequence 59 from patent US 7262338. 1772 bp unidentified QL-ELE-00-006 180 bp View
EA284490.1 emblrelpat Sequence 62 from patent US 7262338. 2866 bp unidentified QL-ELE-00-006 180 bp View
EA284512.1 emblrelpat Sequence 100 from patent US 7262338. 6484 bp unidentified QL-ELE-00-006 180 bp View
EA284542.1 emblrelpat Sequence 139 from patent US 7262338. 5673 bp unidentified QL-ELE-00-006 180 bp View
EA284545.1 emblrelpat Sequence 142 from patent US 7262338. 5544 bp unidentified QL-ELE-00-006 180 bp View
EA311607.1 emblrelpat Sequence 40 from patent US 7291765. 8810 bp unidentified QL-ELE-00-006 180 bp View
EA327081.1 emblrelpat Sequence 19 from patent US 7304209. 1839 bp unidentified QL-ELE-00-006 180 bp View
EA501375.1 emblrelpat Sequence 63 from patent US 7361813. 323 bp unidentified QL-ELE-00-006 180 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.