Amplicon details

Amplicon:

180 bp
1     gaatcctgtt gccggtcttg cgatgattat catataattt ctgttgaatt
51    acgttaagca tgtaataatt aacatgtaat gcatgacgtt atttatgaga
101   tgggttttta tgattagagt cccgcaatta tacatttaat acgcgataga
151   aaacaaaata tagcgcgcaa actaggataa  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
MK439385.1 nt Agrobacterium tumefaciens strain Ke... 243905 bp Agrobacterium tumefaciens QL-ELE-00-006 180 bp View
MK439386.1 nt Agrobacterium tumefaciens strain T3... 203781 bp Agrobacterium tumefaciens QL-ELE-00-006 180 bp View
MN187555.1 nt Cloning vector pEAQ-EGgw, complete ... 12386 bp Cloning vector pEAQ-EGgw QL-ELE-00-006 180 bp View
MN187555.1 nt Cloning vector pEAQ-EGgw, complete ... 12386 bp Cloning vector pEAQ-EGgw QL-ELE-00-006 180 bp View
MS900815.1 emblrelpat Sequence 62 from Patent EP3156491. 14901 bp synthetic construct QL-ELE-00-006 180 bp View
MS900840.1 emblrelpat Sequence 87 from Patent EP3156491. 14065 bp synthetic construct QL-ELE-00-006 180 bp View
MN187556.1 nt Cloning vector pEAQ-TRgw, complete ... 12362 bp Cloning vector pEAQ-TRgw QL-ELE-00-006 180 bp View
MN187556.1 nt Cloning vector pEAQ-TRgw, complete ... 12362 bp Cloning vector pEAQ-TRgw QL-ELE-00-006 180 bp View
MS901023.1 emblrelpat Sequence 33 from Patent EP3156489. 11205 bp synthetic construct QL-ELE-00-006 180 bp View
MN187557.1 nt Cloning vector pEAQ-gwEG, complete ... 12387 bp Cloning vector pEAQ-gwEG QL-ELE-00-006 180 bp View
MN187557.1 nt Cloning vector pEAQ-gwEG, complete ... 12387 bp Cloning vector pEAQ-gwEG QL-ELE-00-006 180 bp View
DI359127.1 emblrelpat KR 1020130025447-A/63: Corn Event M... 323 bp unidentified QL-ELE-00-006 180 bp View
MN187558.1 nt Cloning vector pEAQ-gwTR, complete ... 12363 bp Cloning vector pEAQ-gwTR QL-ELE-00-006 180 bp View
MN187558.1 nt Cloning vector pEAQ-gwTR, complete ... 12363 bp Cloning vector pEAQ-gwTR QL-ELE-00-006 180 bp View
MN187559.1 nt Cloning vector pEAQ-gwTRH, complete... 12387 bp Cloning vector pEAQ-gwTRH QL-ELE-00-006 180 bp View
MN187559.1 nt Cloning vector pEAQ-gwTRH, complete... 12387 bp Cloning vector pEAQ-gwTRH QL-ELE-00-006 180 bp View
MN187560.1 nt Cloning vector pEAQ-EGgw-DeltaP19, ... 10909 bp Cloning vector pEAQ-EGgw-DeltaP19 QL-ELE-00-006 180 bp View
MN187560.1 nt Cloning vector pEAQ-EGgw-DeltaP19, ... 10909 bp Cloning vector pEAQ-EGgw-DeltaP19 QL-ELE-00-006 180 bp View
MN187561.1 nt Cloning vector pEAQ-TRgw-DeltaP19, ... 10885 bp Cloning vector pEAQ-TRgw-DeltaP19 QL-ELE-00-006 180 bp View
MN187562.1 nt Cloning vector pEAQ-gwEG-DeltaP19, ... 10910 bp Cloning vector pEAQ-gwEG-DeltaP19 QL-ELE-00-006 180 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.