Amplicon details

Amplicon:

180 bp
1     gaatcctgtt gccggtcttg cgatgattat catataattt ctgttgaatt
51    acgttaagca tgtaataatt aacatgtaat gcatgacgtt atttatgaga
101   tgggttttta tgattagagt cccgcaatta tacatttaat acgcgataga
151   aaacaaaata tagcgcgcaa actaggataa  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
MN728551.1 nt Cloning vector pSMXL6-SMXL6-HA, com... 14241 bp Cloning vector pSMXL6-SMXL6-HA QL-ELE-00-006 180 bp View
MN793977.1 nt Cloning vector pSMXL6-SMXL6-no-EAR-... 14226 bp Cloning vector pSMXL6-SMXL6-no-EAR-HA QL-ELE-00-006 180 bp View
AP019390.1 nt Gateway binary vector pB4nVGW3 DNA,... 12317 bp Gateway binary vector pB4nVGW3 QL-ELE-00-006 180 bp View
AP019391.1 nt Gateway binary vector pB4cVGW DNA, ... 11774 bp Gateway binary vector pB4cVGW QL-ELE-00-006 180 bp View
AP019391.1 nt Gateway binary vector pB4cVGW DNA, ... 11774 bp Gateway binary vector pB4cVGW QL-ELE-00-006 180 bp View
AP019392.1 nt Gateway binary vector pB4GWnV3 DNA,... 12315 bp Gateway binary vector pB4GWnV3 QL-ELE-00-006 180 bp View
AP019392.1 nt Gateway binary vector pB4GWnV3 DNA,... 12315 bp Gateway binary vector pB4GWnV3 QL-ELE-00-006 180 bp View
AP019393.1 nt Gateway binary vector pB4GWcV DNA, ... 11772 bp Gateway binary vector pB4GWcV QL-ELE-00-006 180 bp View
AP019393.1 nt Gateway binary vector pB4GWcV DNA, ... 11772 bp Gateway binary vector pB4GWcV QL-ELE-00-006 180 bp View
LC506529.1 nt Plant binary vector pLC20GWH DNA, c... 26615 bp Plant binary vector pLC20GWH QL-ELE-00-006 180 bp View
LC506530.1 nt Plant binary vector pLC31GWH DNA, c... 14192 bp Plant binary vector pLC31GWH QL-ELE-00-006 180 bp View
MN043927.1 nt Cloning vector pFLHD, complete sequ... 9460 bp Cloning vector pFLHD QL-ELE-00-006 180 bp View
MN043929.1 nt Cloning vector pFLP19, complete seq... 5256 bp Cloning vector pFLP19 QL-ELE-00-006 180 bp View
MN043930.1 nt Cloning vector pFLHC, complete sequ... 9460 bp Cloning vector pFLHC QL-ELE-00-006 180 bp View
MN043931.1 nt Cloning vector HITI-EF1a, complete ... 3732 bp Cloning vector HITI-EF1a QL-ELE-00-006 180 bp View
MN043932.1 nt Cloning vector HITI-Lectin, complet... 3732 bp Cloning vector HITI-Lectin QL-ELE-00-006 180 bp View
MN043933.1 nt Cloning vector pFLINT-base, complet... 5530 bp Cloning vector pFLINT-base QL-ELE-00-006 180 bp View
MN956899.1 nt Cloning vector pDamBOB, complete se... 6035 bp Cloning vector pDamBOB QL-ELE-00-006 180 bp View
MN956899.1 nt Cloning vector pDamBOB, complete se... 6035 bp Cloning vector pDamBOB QL-ELE-00-006 180 bp View
MN991175.1 nt Cloning vector pBOB11_C-Term, compl... 8509 bp Cloning vector pBOB11_C-Term QL-ELE-00-006 180 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.