Amplicon details

Amplicon:

180 bp
1     gaatcctgtt gccggtcttg cgatgattat catataattt ctgttgaatt
51    acgttaagca tgtaataatt aacatgtaat gcatgacgtt atttatgaga
101   tgggttttta tgattagagt cccgcaatta tacatttaat acgcgataga
151   aaacaaaata tagcgcgcaa actaggataa  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
MH383106.1 nt Plant Stable Overexpression Vector ... 8756 bp Plant Stable Overexpression Vector pRHVnHA QL-ELE-00-006 180 bp View
MH397716.1 nt Plant Stable Overexpression Vector ... 9359 bp Plant Stable Overexpression Vector pRHVnGFP QL-ELE-00-006 180 bp View
MH397717.1 nt Plant Stable Overexpression Vector ... 8778 bp Plant Stable Overexpression Vector pRHVcHA QL-ELE-00-006 180 bp View
MH397718.1 nt Plant Stable Overexpression Vector ... 8805 bp Plant Stable Overexpression Vector pRHVcMyc QL-ELE-00-006 180 bp View
MH397719.1 nt Plant Stable Overexpression Vector ... 9381 bp Plant Stable Overexpression Vector pRHVcGFP QL-ELE-00-006 180 bp View
MH397720.1 nt Plant Stable Overexpression Vector ... 9357 bp Plant Stable Overexpression Vector pRHVcRFP QL-ELE-00-006 180 bp View
MH423061.1 nt Plant Stable Expression Vector pRGE... 6428 bp Plant Stable Expression Vector pRGE QL-ELE-00-006 180 bp View
MH423062.1 nt Plant Stable Expression Vector pRGE... 6553 bp Plant Stable Expression Vector pRGEcHA QL-ELE-00-006 180 bp View
MH423063.1 nt Plant Stable Expression Vector pRGE... 6619 bp Plant Stable Expression Vector pRGEcMyc QL-ELE-00-006 180 bp View
MH427725.1 nt Plant Stable Expression Vector pRGE... 7156 bp Plant Stable Expression Vector pRGEcYFP QL-ELE-00-006 180 bp View
MH427726.1 nt Plant Stable Overexpression Vector ... 8415 bp Plant Stable Overexpression Vector pRGV QL-ELE-00-006 180 bp View
MH450168.1 nt Plant Stable Overexpression Vector ... 8540 bp Plant Stable Overexpression Vector pRGVcHA QL-ELE-00-006 180 bp View
MH450169.1 nt Plant Stable Overexpression Vector ... 8606 bp Plant Stable Overexpression Vector pRGVcMyc QL-ELE-00-006 180 bp View
MH450170.1 nt Plant Stable Overexpression Vector ... 9143 bp Plant Stable Overexpression Vector pRGVcGFP QL-ELE-00-006 180 bp View
MH450171.1 nt Plant Stable Overexpression Vector ... 9119 bp Plant Stable Overexpression Vector pRGVcRFP QL-ELE-00-006 180 bp View
MH450172.1 nt Plant Genome Editing Vector pRHCas9... 13079 bp Plant Genome Editing Vector pRHCas9 QL-ELE-00-006 180 bp View
MH450173.1 nt Plant Genome Editing Vector pRGCas9... 12841 bp Plant Genome Editing Vector pRGCas9 QL-ELE-00-006 180 bp View
MP255974.1 emblrelpat Sequence 43 from Patent EP3519563. 5073 bp synthetic construct QL-ELE-00-006 180 bp View
KY913902.1 nt Ti plasmid binary vector pGZ13.0313... 18323 bp Ti plasmid binary vector pGZ13.0313 QL-ELE-00-006 180 bp View
MP351645.1 emblrelpat Sequence 5 from Patent EP3547825. 19617 bp synthetic construct QL-ELE-00-006 180 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.