Amplicon details

Amplicon:

180 bp
1     gaatcctgtt gccggtcttg cgatgattat catataattt ctgttgaatt
51    acgttaagca tgtaataatt aacatgtaat gcatgacgtt atttatgaga
101   tgggttttta tgattagagt cccgcaatta tacatttaat acgcgataga
151   aaacaaaata tagcgcgcaa actaggataa  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
MG637043.1 nt Shuttle vector PCY, complete sequence. 10347 bp Shuttle vector PCY QL-ELE-00-006 180 bp View
MH142259.1 nt Cloning vector pM2Z-fun, complete s... 3752 bp Cloning vector pM2Z-fun QL-ELE-00-006 180 bp View
DI166465.1 emblrelpat TRACEABILITY OF TRANSGENIC SEEDS IN... 4313 bp unidentified QL-ELE-00-006 180 bp View
MH325168.1 nt Protoplast Transient Expression Vec... 2168 bp Protoplast Transient Expression Vector pRTE QL-ELE-00-006 180 bp View
MH325169.1 nt Protoplast Transient Expression Vec... 2896 bp Protoplast Transient Expression Vector pRTEcYFP QL-ELE-00-006 180 bp View
MH325170.1 nt Protoplast Transient Overexpression... 4155 bp Protoplast Transient Overexpression Vector pRTV QL-ELE-00-006 180 bp View
MH325171.1 nt Protoplast Transient Overexpression... 4258 bp Protoplast Transient Overexpression Vector pRTVnHA QL-ELE-00-006 180 bp View
MH347264.1 nt Protoplast Transient Overexpression... 4324 bp Protoplast Transient Overexpression Vector pRTVnMyc QL-ELE-00-006 180 bp View
MH347265.1 nt Protoplast Transient Overexpression... 4861 bp Protoplast Transient Overexpression Vector pRTVnGFP QL-ELE-00-006 180 bp View
MH347266.1 nt Protoplast Transient Overexpression... 4861 bp Protoplast Transient Overexpression Vector pRTVnYFP QL-ELE-00-006 180 bp View
MH347267.1 nt Protoplast Transient Overexpression... 4837 bp Protoplast Transient Overexpression Vector pRTVnRFP QL-ELE-00-006 180 bp View
MH373670.1 nt Protoplast Transient Overexpression... 4280 bp Protoplast Transient Overexpression Vector pRTVcHA QL-ELE-00-006 180 bp View
MH373671.1 nt Protoplast Transient Overexpression... 4307 bp Protoplast Transient Overexpression Vector pRTVcMyc QL-ELE-00-006 180 bp View
MH373673.1 nt Protoplast Transient Overexpression... 4883 bp Protoplast Transient Overexpression Vector pRTVcYFP QL-ELE-00-006 180 bp View
MH373674.1 nt Protoplast Transient Overexpression... 4859 bp Protoplast Transient Overexpression Vector pRTVcRFP QL-ELE-00-006 180 bp View
MH373675.1 nt Protoplast BiFC Vector pRTVnVN, com... 5994 bp Protoplast BiFC Vector pRTVnVN QL-ELE-00-006 180 bp View
MH373677.1 nt Protoplast BiFC Vector pRTVcVN, com... 6013 bp Protoplast BiFC Vector pRTVcVN QL-ELE-00-006 180 bp View
MH373678.1 nt Protoplast BiFC Vector pRTVcVC, com... 5797 bp Protoplast BiFC Vector pRTVcVC QL-ELE-00-006 180 bp View
MH373679.1 nt Plant Stable Expression Vector pRHE... 6666 bp Plant Stable Expression Vector pRHE QL-ELE-00-006 180 bp View
MH383102.1 nt Plant Stable Expression Vector pRHE... 6791 bp Plant Stable Expression Vector pRHEcHA QL-ELE-00-006 180 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.