Amplicon details

Amplicon:

180 bp
1     gaatcctgtt gccggtcttg cgatgattat catataattt ctgttgaatt
51    acgttaagca tgtaataatt aacatgtaat gcatgacgtt atttatgaga
101   tgggttttta tgattagagt cccgcaatta tacatttaat acgcgataga
151   aaacaaaata tagcgcgcaa actaggataa  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
KY420084.1 nt Plant TransGene Stacking II system ... 17992 bp Plant TransGene Stacking II system binary acceptor vector pYLTAC380GW QL-ELE-00-006 180 bp View
KY420086.1 nt Plant TransGene Stacking II system ... 7560 bp Plant TransGene Stacking II system marker-free donor vector pYLMF-N QL-ELE-00-006 180 bp View
KY420087.1 nt Plant TransGene Stacking II system ... 7246 bp Plant TransGene Stacking II system marker-free donor vector pYLMF-B QL-ELE-00-006 180 bp View
KX683862.1 nt Binary vector pAGW633, complete seq... 10326 bp Binary vector pAGW633 QL-ELE-00-006 180 bp View
KX683862.1 nt Binary vector pAGW633, complete seq... 10326 bp Binary vector pAGW633 QL-ELE-00-006 180 bp View
KX510271.1 nt Plant expression vector pCB302 LIC ... 5756 bp Plant expression vector pCB302 LIC GFP QL-ELE-00-006 180 bp View
KY000041.1 nt Agrobacterium tumefaciens strain CF... 206707 bp Agrobacterium tumefaciens QL-ELE-00-006 180 bp View
KY000042.1 nt Agrobacterium tumefaciens strain CF... 238492 bp Agrobacterium tumefaciens QL-ELE-00-006 180 bp View
KY000043.1 nt Agrobacterium rhizogenes strain CFB... 238155 bp Rhizobium rhizogenes QL-ELE-00-006 180 bp View
KY000044.1 nt Agrobacterium fabrum strain CFBP193... 203551 bp Agrobacterium fabrum QL-ELE-00-006 180 bp View
KY000047.1 nt Agrobacterium genomosp. 1 strain CF... 185402 bp Agrobacterium tumefaciens QL-ELE-00-006 180 bp View
KY000050.1 nt Agrobacterium tumefaciens strain CF... 177135 bp Agrobacterium tumefaciens QL-ELE-00-006 180 bp View
KY000051.1 nt Agrobacterium genomosp. 1 strain CF... 216754 bp Agrobacterium tumefaciens QL-ELE-00-006 180 bp View
KY000057.1 nt Agrobacterium fabrum strain CFBP550... 203533 bp Agrobacterium fabrum QL-ELE-00-006 180 bp View
KX388151.1 nt Cloning vector pCAMBIA1300DM_OsU6_A... 14640 bp Cloning vector pCAMBIA1300DM_OsU6_AarI_Cas9 QL-ELE-00-006 180 bp View
KX388151.1 nt Cloning vector pCAMBIA1300DM_OsU6_A... 14640 bp Cloning vector pCAMBIA1300DM_OsU6_AarI_Cas9 QL-ELE-00-006 180 bp View
KX400856.1 nt Cloning vector pCAMBIA1300-OsU3(Aar... 14605 bp Cloning vector pCAMBIA1300-OsU3(AarI)-Cas9 QL-ELE-00-006 180 bp View
KX755248.1 nt Cloning vector pCambiaMX9, complete... 6843 bp Cloning vector pCambiaMX9 QL-ELE-00-006 180 bp View
KX755249.1 nt Cloning vector pGapneoR3, complete ... 9101 bp Cloning vector pGapneoR3 QL-ELE-00-006 180 bp View
LC222467.1 nt Synthetic construct CamF3'5'H, CtA3... 5838 bp synthetic construct QL-ELE-00-006 180 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.