Amplicon details

Amplicon:

180 bp
1     gaatcctgtt gccggtcttg cgatgattat catataattt ctgttgaatt
51    acgttaagca tgtaataatt aacatgtaat gcatgacgtt atttatgaga
101   tgggttttta tgattagagt cccgcaatta tacatttaat acgcgataga
151   aaacaaaata tagcgcgcaa actaggataa  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
LT725547.1 nt Gateway expression vector pAGRIKOLA... 9461 bp Gateway expression vector pAGRIKOLA-CATMA5a20750 QL-ELE-00-006 180 bp View
LT725548.1 nt Gateway expression vector pAGRIKOLA... 9453 bp Gateway expression vector pAGRIKOLA-CATMA5a20770 QL-ELE-00-006 180 bp View
LT725549.1 nt Gateway expression vector pAGRIKOLA... 9453 bp Gateway expression vector pAGRIKOLA-CATMA5a20920 QL-ELE-00-006 180 bp View
LT725550.1 nt Gateway expression vector pAGRIKOLA... 9729 bp Gateway expression vector pAGRIKOLA-CATMA5a20930 QL-ELE-00-006 180 bp View
LT725551.1 nt Gateway expression vector pAGRIKOLA... 9495 bp Gateway expression vector pAGRIKOLA-CATMA5a21650 QL-ELE-00-006 180 bp View
LT725552.1 nt Gateway expression vector pAGRIKOLA... 9525 bp Gateway expression vector pAGRIKOLA-CATMA5a21665 QL-ELE-00-006 180 bp View
LT725553.1 nt Gateway expression vector pAGRIKOLA... 9471 bp Gateway expression vector pAGRIKOLA-CATMA5a23120 QL-ELE-00-006 180 bp View
LT725554.1 nt Gateway expression vector pAGRIKOLA... 9475 bp Gateway expression vector pAGRIKOLA-CATMA5a23470 QL-ELE-00-006 180 bp View
LT725555.1 nt Gateway expression vector pAGRIKOLA... 9935 bp Gateway expression vector pAGRIKOLA-CATMA5a23500 QL-ELE-00-006 180 bp View
LT725556.1 nt Gateway expression vector pAGRIKOLA... 9635 bp Gateway expression vector pAGRIKOLA-CATMA5a23850 QL-ELE-00-006 180 bp View
LT725557.1 nt Gateway expression vector pAGRIKOLA... 9573 bp Gateway expression vector pAGRIKOLA-CATMA5a24126 QL-ELE-00-006 180 bp View
LT725558.1 nt Gateway expression vector pAGRIKOLA... 9489 bp Gateway expression vector pAGRIKOLA-CATMA5a24350 QL-ELE-00-006 180 bp View
LT725559.1 nt Gateway expression vector pAGRIKOLA... 9473 bp Gateway expression vector pAGRIKOLA-CATMA5a25090 QL-ELE-00-006 180 bp View
DI145824.1 emblrelpat COORDINATED DECREASE AND INCREASE O... 7713 bp unidentified QL-ELE-00-006 180 bp View
LT725560.1 nt Gateway expression vector pAGRIKOLA... 9615 bp Gateway expression vector pAGRIKOLA-CATMA5a32570 QL-ELE-00-006 180 bp View
LT725561.1 nt Gateway expression vector pAGRIKOLA... 9735 bp Gateway expression vector pAGRIKOLA-CATMA5a33150 QL-ELE-00-006 180 bp View
LT725562.1 nt Gateway expression vector pAGRIKOLA... 9545 bp Gateway expression vector pAGRIKOLA-CATMA5a33520 QL-ELE-00-006 180 bp View
LT725563.1 nt Gateway expression vector pAGRIKOLA... 9451 bp Gateway expression vector pAGRIKOLA-CATMA5a35520 QL-ELE-00-006 180 bp View
LT725564.1 nt Gateway expression vector pAGRIKOLA... 9523 bp Gateway expression vector pAGRIKOLA-CATMA5a36020 QL-ELE-00-006 180 bp View
LT725565.1 nt Gateway expression vector pAGRIKOLA... 9699 bp Gateway expression vector pAGRIKOLA-CATMA5a36680 QL-ELE-00-006 180 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.