Amplicon details

Amplicon:

180 bp
1     gaatcctgtt gccggtcttg cgatgattat catataattt ctgttgaatt
51    acgttaagca tgtaataatt aacatgtaat gcatgacgtt atttatgaga
101   tgggttttta tgattagagt cccgcaatta tacatttaat acgcgataga
151   aaacaaaata tagcgcgcaa actaggataa  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
LT725528.1 nt Gateway expression vector pAGRIKOLA... 9507 bp Gateway expression vector pAGRIKOLA-CATMA5a12100 QL-ELE-00-006 180 bp View
LT725529.1 nt Gateway expression vector pAGRIKOLA... 9935 bp Gateway expression vector pAGRIKOLA-CATMA5a12150 QL-ELE-00-006 180 bp View
LT725530.1 nt Gateway expression vector pAGRIKOLA... 9519 bp Gateway expression vector pAGRIKOLA-CATMA5a12230 QL-ELE-00-006 180 bp View
LT725531.1 nt Gateway expression vector pAGRIKOLA... 9521 bp Gateway expression vector pAGRIKOLA-CATMA5a12240 QL-ELE-00-006 180 bp View
LT725532.1 nt Gateway expression vector pAGRIKOLA... 9641 bp Gateway expression vector pAGRIKOLA-CATMA5a12570 QL-ELE-00-006 180 bp View
LT725533.1 nt Gateway expression vector pAGRIKOLA... 9469 bp Gateway expression vector pAGRIKOLA-CATMA5a14540 QL-ELE-00-006 180 bp View
LT725534.1 nt Gateway expression vector pAGRIKOLA... 9735 bp Gateway expression vector pAGRIKOLA-CATMA5a14770 QL-ELE-00-006 180 bp View
LT725535.1 nt Gateway expression vector pAGRIKOLA... 9499 bp Gateway expression vector pAGRIKOLA-CATMA5a14920 QL-ELE-00-006 180 bp View
LT725536.1 nt Gateway expression vector pAGRIKOLA... 9935 bp Gateway expression vector pAGRIKOLA-CATMA5a15190 QL-ELE-00-006 180 bp View
LT725537.1 nt Gateway expression vector pAGRIKOLA... 9495 bp Gateway expression vector pAGRIKOLA-CATMA5a16090 QL-ELE-00-006 180 bp View
LT725538.1 nt Gateway expression vector pAGRIKOLA... 9639 bp Gateway expression vector pAGRIKOLA-CATMA5a16370 QL-ELE-00-006 180 bp View
LT725539.1 nt Gateway expression vector pAGRIKOLA... 9447 bp Gateway expression vector pAGRIKOLA-CATMA5a16510 QL-ELE-00-006 180 bp View
LT725540.1 nt Gateway expression vector pAGRIKOLA... 9481 bp Gateway expression vector pAGRIKOLA-CATMA5a16550 QL-ELE-00-006 180 bp View
LT725541.1 nt Gateway expression vector pAGRIKOLA... 9627 bp Gateway expression vector pAGRIKOLA-CATMA5a16570 QL-ELE-00-006 180 bp View
DI142929.1 emblrelpat COORDINATED DECREASE AND INCREASE O... 8179 bp unidentified QL-ELE-00-006 180 bp View
LT725542.1 nt Gateway expression vector pAGRIKOLA... 9933 bp Gateway expression vector pAGRIKOLA-CATMA5a16740 QL-ELE-00-006 180 bp View
LT725543.1 nt Gateway expression vector pAGRIKOLA... 9873 bp Gateway expression vector pAGRIKOLA-CATMA5a16870 QL-ELE-00-006 180 bp View
LT725544.1 nt Gateway expression vector pAGRIKOLA... 9527 bp Gateway expression vector pAGRIKOLA-CATMA5a18680 QL-ELE-00-006 180 bp View
LT725545.1 nt Gateway expression vector pAGRIKOLA... 9935 bp Gateway expression vector pAGRIKOLA-CATMA5a19260 QL-ELE-00-006 180 bp View
LT725546.1 nt Gateway expression vector pAGRIKOLA... 9447 bp Gateway expression vector pAGRIKOLA-CATMA5a20625 QL-ELE-00-006 180 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.