Amplicon details

Amplicon:

180 bp
1     gaatcctgtt gccggtcttg cgatgattat catataattt ctgttgaatt
51    acgttaagca tgtaataatt aacatgtaat gcatgacgtt atttatgaga
101   tgggttttta tgattagagt cccgcaatta tacatttaat acgcgataga
151   aaacaaaata tagcgcgcaa actaggataa  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
LT725471.1 nt Gateway expression vector pAGRIKOLA... 9443 bp Gateway expression vector pAGRIKOLA-CATMA4a38980 QL-ELE-00-006 180 bp View
LT725472.1 nt Gateway expression vector pAGRIKOLA... 9469 bp Gateway expression vector pAGRIKOLA-CATMA4a39330 QL-ELE-00-006 180 bp View
LT725473.1 nt Gateway expression vector pAGRIKOLA... 9519 bp Gateway expression vector pAGRIKOLA-CATMA4a39490 QL-ELE-00-006 180 bp View
LT725474.1 nt Gateway expression vector pAGRIKOLA... 9535 bp Gateway expression vector pAGRIKOLA-CATMA4a40092 QL-ELE-00-006 180 bp View
LT725475.1 nt Gateway expression vector pAGRIKOLA... 9553 bp Gateway expression vector pAGRIKOLA-CATMA4a40590 QL-ELE-00-006 180 bp View
LT725476.1 nt Gateway expression vector pAGRIKOLA... 9551 bp Gateway expression vector pAGRIKOLA-CATMA4a40615 QL-ELE-00-006 180 bp View
LT725477.1 nt Gateway expression vector pAGRIKOLA... 9623 bp Gateway expression vector pAGRIKOLA-CATMA4a40810 QL-ELE-00-006 180 bp View
LT725478.1 nt Gateway expression vector pAGRIKOLA... 9625 bp Gateway expression vector pAGRIKOLA-CATMA4a41396 QL-ELE-00-006 180 bp View
LT725479.1 nt Gateway expression vector pAGRIKOLA... 9589 bp Gateway expression vector pAGRIKOLA-CATMA4a41510 QL-ELE-00-006 180 bp View
LT725480.1 nt Gateway expression vector pAGRIKOLA... 9473 bp Gateway expression vector pAGRIKOLA-CATMA4c42023 QL-ELE-00-006 180 bp View
LT725481.1 nt Gateway expression vector pAGRIKOLA... 9549 bp Gateway expression vector pAGRIKOLA-CATMA4c42035 QL-ELE-00-006 180 bp View
LT725482.1 nt Gateway expression vector pAGRIKOLA... 9631 bp Gateway expression vector pAGRIKOLA-CATMA4c42300 QL-ELE-00-006 180 bp View
LT725483.1 nt Gateway expression vector pAGRIKOLA... 9535 bp Gateway expression vector pAGRIKOLA-CATMA4c42369 QL-ELE-00-006 180 bp View
DI136493.1 emblrelpat Regulation of Viral Gene Expression. 12766 bp unidentified QL-ELE-00-006 180 bp View
LT725484.1 nt Gateway expression vector pAGRIKOLA... 10135 bp Gateway expression vector pAGRIKOLA-CATMA4c42374 QL-ELE-00-006 180 bp View
DI136493.1 emblrelpat Regulation of Viral Gene Expression. 12766 bp unidentified QL-ELE-00-006 180 bp View
LT725485.1 nt Gateway expression vector pAGRIKOLA... 9455 bp Gateway expression vector pAGRIKOLA-CATMA4c42401 QL-ELE-00-006 180 bp View
LT725486.1 nt Gateway expression vector pAGRIKOLA... 9869 bp Gateway expression vector pAGRIKOLA-CATMA4c42419 QL-ELE-00-006 180 bp View
LT725487.1 nt Gateway expression vector pAGRIKOLA... 9439 bp Gateway expression vector pAGRIKOLA-CATMA4c42654 QL-ELE-00-006 180 bp View
LT725488.1 nt Gateway expression vector pAGRIKOLA... 9549 bp Gateway expression vector pAGRIKOLA-CATMA4c42662 QL-ELE-00-006 180 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.