Amplicon details

Amplicon:

180 bp
1     gaatcctgtt gccggtcttg cgatgattat catataattt ctgttgaatt
51    acgttaagca tgtaataatt aacatgtaat gcatgacgtt atttatgaga
101   tgggttttta tgattagagt cccgcaatta tacatttaat acgcgataga
151   aaacaaaata tagcgcgcaa actaggataa  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
LT725005.1 nt Gateway expression vector pAGRIKOLA... 9479 bp Gateway expression vector pAGRIKOLA-CATMA2a12680 QL-ELE-00-006 180 bp View
LT725006.1 nt Gateway expression vector pAGRIKOLA... 9783 bp Gateway expression vector pAGRIKOLA-CATMA2a12700 QL-ELE-00-006 180 bp View
LT725007.1 nt Gateway expression vector pAGRIKOLA... 9473 bp Gateway expression vector pAGRIKOLA-CATMA2a12720 QL-ELE-00-006 180 bp View
LT725008.1 nt Gateway expression vector pAGRIKOLA... 9491 bp Gateway expression vector pAGRIKOLA-CATMA2a12730 QL-ELE-00-006 180 bp View
LT725009.1 nt Gateway expression vector pAGRIKOLA... 9691 bp Gateway expression vector pAGRIKOLA-CATMA2a12735 QL-ELE-00-006 180 bp View
LT725010.1 nt Gateway expression vector pAGRIKOLA... 9779 bp Gateway expression vector pAGRIKOLA-CATMA2a12740 QL-ELE-00-006 180 bp View
LT725011.1 nt Gateway expression vector pAGRIKOLA... 9449 bp Gateway expression vector pAGRIKOLA-CATMA2a12760 QL-ELE-00-006 180 bp View
LT725012.1 nt Gateway expression vector pAGRIKOLA... 9599 bp Gateway expression vector pAGRIKOLA-CATMA2a12770 QL-ELE-00-006 180 bp View
LT725013.1 nt Gateway expression vector pAGRIKOLA... 9437 bp Gateway expression vector pAGRIKOLA-CATMA2a12775 QL-ELE-00-006 180 bp View
LT725014.1 nt Gateway expression vector pAGRIKOLA... 9583 bp Gateway expression vector pAGRIKOLA-CATMA2a12780 QL-ELE-00-006 180 bp View
LT725015.1 nt Gateway expression vector pAGRIKOLA... 9735 bp Gateway expression vector pAGRIKOLA-CATMA2a12810 QL-ELE-00-006 180 bp View
LT725016.1 nt Gateway expression vector pAGRIKOLA... 9493 bp Gateway expression vector pAGRIKOLA-CATMA2a12900 QL-ELE-00-006 180 bp View
LT725017.1 nt Gateway expression vector pAGRIKOLA... 9939 bp Gateway expression vector pAGRIKOLA-CATMA2a12940 QL-ELE-00-006 180 bp View
LT725018.1 nt Gateway expression vector pAGRIKOLA... 9459 bp Gateway expression vector pAGRIKOLA-CATMA2a12960 QL-ELE-00-006 180 bp View
LT725019.1 nt Gateway expression vector pAGRIKOLA... 9533 bp Gateway expression vector pAGRIKOLA-CATMA2a13120 QL-ELE-00-006 180 bp View
LT725020.1 nt Gateway expression vector pAGRIKOLA... 9529 bp Gateway expression vector pAGRIKOLA-CATMA2a13140 QL-ELE-00-006 180 bp View
LT725021.1 nt Gateway expression vector pAGRIKOLA... 9451 bp Gateway expression vector pAGRIKOLA-CATMA2a13210 QL-ELE-00-006 180 bp View
LT725022.1 nt Gateway expression vector pAGRIKOLA... 9795 bp Gateway expression vector pAGRIKOLA-CATMA2a13220 QL-ELE-00-006 180 bp View
LT725023.1 nt Gateway expression vector pAGRIKOLA... 9481 bp Gateway expression vector pAGRIKOLA-CATMA2a13250 QL-ELE-00-006 180 bp View
LT725024.1 nt Gateway expression vector pAGRIKOLA... 10135 bp Gateway expression vector pAGRIKOLA-CATMA2a13270 QL-ELE-00-006 180 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.