Amplicon details

Amplicon:

180 bp
1     gaatcctgtt gccggtcttg cgatgattat catataattt ctgttgaatt
51    acgttaagca tgtaataatt aacatgtaat gcatgacgtt atttatgaga
101   tgggttttta tgattagagt cccgcaatta tacatttaat acgcgataga
151   aaacaaaata tagcgcgcaa actaggataa  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
LT724983.1 nt Gateway expression vector pAGRIKOLA... 9805 bp Gateway expression vector pAGRIKOLA-CATMA2a03690 QL-ELE-00-006 180 bp View
LT724984.1 nt Gateway expression vector pAGRIKOLA... 9483 bp Gateway expression vector pAGRIKOLA-CATMA2a03823 QL-ELE-00-006 180 bp View
LT724985.1 nt Gateway expression vector pAGRIKOLA... 9497 bp Gateway expression vector pAGRIKOLA-CATMA2a03826 QL-ELE-00-006 180 bp View
LT724986.1 nt Gateway expression vector pAGRIKOLA... 9515 bp Gateway expression vector pAGRIKOLA-CATMA2a03860 QL-ELE-00-006 180 bp View
LT724987.1 nt Gateway expression vector pAGRIKOLA... 9471 bp Gateway expression vector pAGRIKOLA-CATMA2a05200 QL-ELE-00-006 180 bp View
LT724988.1 nt Gateway expression vector pAGRIKOLA... 9617 bp Gateway expression vector pAGRIKOLA-CATMA2a12330 QL-ELE-00-006 180 bp View
LT724989.1 nt Gateway expression vector pAGRIKOLA... 9801 bp Gateway expression vector pAGRIKOLA-CATMA2a12350 QL-ELE-00-006 180 bp View
LT724990.1 nt Gateway expression vector pAGRIKOLA... 9735 bp Gateway expression vector pAGRIKOLA-CATMA2a12360 QL-ELE-00-006 180 bp View
LT724991.1 nt Gateway expression vector pAGRIKOLA... 9869 bp Gateway expression vector pAGRIKOLA-CATMA2a12370 QL-ELE-00-006 180 bp View
LT724992.1 nt Gateway expression vector pAGRIKOLA... 9501 bp Gateway expression vector pAGRIKOLA-CATMA2a12390 QL-ELE-00-006 180 bp View
LT724993.1 nt Gateway expression vector pAGRIKOLA... 9443 bp Gateway expression vector pAGRIKOLA-CATMA2a12410 QL-ELE-00-006 180 bp View
DI122223.1 emblrelpat Vector for Preparation of Transform... 9762 bp unidentified QL-ELE-00-006 180 bp View
LT724994.1 nt Gateway expression vector pAGRIKOLA... 9679 bp Gateway expression vector pAGRIKOLA-CATMA2a12420 QL-ELE-00-006 180 bp View
LT724995.1 nt Gateway expression vector pAGRIKOLA... 9543 bp Gateway expression vector pAGRIKOLA-CATMA2a12430 QL-ELE-00-006 180 bp View
LT724996.1 nt Gateway expression vector pAGRIKOLA... 9869 bp Gateway expression vector pAGRIKOLA-CATMA2a12450 QL-ELE-00-006 180 bp View
LT724997.1 nt Gateway expression vector pAGRIKOLA... 9475 bp Gateway expression vector pAGRIKOLA-CATMA2a12560 QL-ELE-00-006 180 bp View
LT724998.1 nt Gateway expression vector pAGRIKOLA... 9475 bp Gateway expression vector pAGRIKOLA-CATMA2a12570 QL-ELE-00-006 180 bp View
LT724999.1 nt Gateway expression vector pAGRIKOLA... 9707 bp Gateway expression vector pAGRIKOLA-CATMA2a12610 QL-ELE-00-006 180 bp View
LT725000.1 nt Gateway expression vector pAGRIKOLA... 9545 bp Gateway expression vector pAGRIKOLA-CATMA2a12620 QL-ELE-00-006 180 bp View
LT725001.1 nt Gateway expression vector pAGRIKOLA... 9449 bp Gateway expression vector pAGRIKOLA-CATMA2a12630 QL-ELE-00-006 180 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.