Amplicon details

Amplicon:

180 bp
1     gaatcctgtt gccggtcttg cgatgattat catataattt ctgttgaatt
51    acgttaagca tgtaataatt aacatgtaat gcatgacgtt atttatgaga
101   tgggttttta tgattagagt cccgcaatta tacatttaat acgcgataga
151   aaacaaaata tagcgcgcaa actaggataa  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
LT725243.1 nt Gateway expression vector pAGRIKOLA... 9933 bp Gateway expression vector pAGRIKOLA-CATMA3a17950 QL-ELE-00-006 180 bp View
LT725244.1 nt Gateway expression vector pAGRIKOLA... 9529 bp Gateway expression vector pAGRIKOLA-CATMA3a17970 QL-ELE-00-006 180 bp View
LT725245.1 nt Gateway expression vector pAGRIKOLA... 9581 bp Gateway expression vector pAGRIKOLA-CATMA3a18160 QL-ELE-00-006 180 bp View
LT725246.1 nt Gateway expression vector pAGRIKOLA... 9935 bp Gateway expression vector pAGRIKOLA-CATMA3a18260 QL-ELE-00-006 180 bp View
LT725247.1 nt Gateway expression vector pAGRIKOLA... 9447 bp Gateway expression vector pAGRIKOLA-CATMA3a18410 QL-ELE-00-006 180 bp View
LT725248.1 nt Gateway expression vector pAGRIKOLA... 9607 bp Gateway expression vector pAGRIKOLA-CATMA3a18450 QL-ELE-00-006 180 bp View
LT725249.1 nt Gateway expression vector pAGRIKOLA... 9535 bp Gateway expression vector pAGRIKOLA-CATMA3a18785 QL-ELE-00-006 180 bp View
LT725250.1 nt Gateway expression vector pAGRIKOLA... 9475 bp Gateway expression vector pAGRIKOLA-CATMA3a19230 QL-ELE-00-006 180 bp View
LT725251.1 nt Gateway expression vector pAGRIKOLA... 9571 bp Gateway expression vector pAGRIKOLA-CATMA3a20050 QL-ELE-00-006 180 bp View
LT725252.1 nt Gateway expression vector pAGRIKOLA... 9935 bp Gateway expression vector pAGRIKOLA-CATMA3a20490 QL-ELE-00-006 180 bp View
LT725253.1 nt Gateway expression vector pAGRIKOLA... 9935 bp Gateway expression vector pAGRIKOLA-CATMA3a20505 QL-ELE-00-006 180 bp View
DI105746.1 emblrelpat Plant with reduced protein content ... 2158 bp unidentified QL-ELE-00-006 180 bp View
LT725254.1 nt Gateway expression vector pAGRIKOLA... 9459 bp Gateway expression vector pAGRIKOLA-CATMA3a20630 QL-ELE-00-006 180 bp View
LT725255.1 nt Gateway expression vector pAGRIKOLA... 9441 bp Gateway expression vector pAGRIKOLA-CATMA3a20640 QL-ELE-00-006 180 bp View
LT725256.1 nt Gateway expression vector pAGRIKOLA... 9735 bp Gateway expression vector pAGRIKOLA-CATMA3a20670 QL-ELE-00-006 180 bp View
LT725257.1 nt Gateway expression vector pAGRIKOLA... 9643 bp Gateway expression vector pAGRIKOLA-CATMA3a22590 QL-ELE-00-006 180 bp View
LT725258.1 nt Gateway expression vector pAGRIKOLA... 9641 bp Gateway expression vector pAGRIKOLA-CATMA3a22715 QL-ELE-00-006 180 bp View
LT725259.1 nt Gateway expression vector pAGRIKOLA... 9459 bp Gateway expression vector pAGRIKOLA-CATMA3a22725 QL-ELE-00-006 180 bp View
LT725260.1 nt Gateway expression vector pAGRIKOLA... 9523 bp Gateway expression vector pAGRIKOLA-CATMA3a22770 QL-ELE-00-006 180 bp View
LT725261.1 nt Gateway expression vector pAGRIKOLA... 9669 bp Gateway expression vector pAGRIKOLA-CATMA3a22990 QL-ELE-00-006 180 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.