Amplicon details

Amplicon:

180 bp
1     gaatcctgtt gccggtcttg cgatgattat catataattt ctgttgaatt
51    acgttaagca tgtaataatt aacatgtaat gcatgacgtt atttatgaga
101   tgggttttta tgattagagt cccgcaatta tacatttaat acgcgataga
151   aaacaaaata tagcgcgcaa actaggataa  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
LC171813.1 nt Dual site Gateway binary vector R4p... 12898 bp Dual site Gateway binary vector R4pGWB6725-MD8 QL-ELE-00-006 180 bp View
LC171814.1 nt Dual site Gateway binary vector R4p... 14677 bp Dual site Gateway binary vector R4pGWB6733-MD8 QL-ELE-00-006 180 bp View
LC171815.1 nt Dual site Gateway binary vector R4p... 14518 bp Dual site Gateway binary vector R4pGWB6735-MD8 QL-ELE-00-006 180 bp View
LC171815.1 nt Dual site Gateway binary vector R4p... 14518 bp Dual site Gateway binary vector R4pGWB6735-MD8 QL-ELE-00-006 180 bp View
LC171816.1 nt Dual site Gateway binary vector R4p... 13582 bp Dual site Gateway binary vector R4pGWB6740-MD8 QL-ELE-00-006 180 bp View
LC171816.1 nt Dual site Gateway binary vector R4p... 13582 bp Dual site Gateway binary vector R4pGWB6740-MD8 QL-ELE-00-006 180 bp View
LC171817.1 nt Dual site Gateway binary vector R4p... 13582 bp Dual site Gateway binary vector R4pGWB6743-MD8 QL-ELE-00-006 180 bp View
LC171817.1 nt Dual site Gateway binary vector R4p... 13582 bp Dual site Gateway binary vector R4pGWB6743-MD8 QL-ELE-00-006 180 bp View
LC171818.1 nt Dual site Gateway binary vector R4p... 13582 bp Dual site Gateway binary vector R4pGWB6750-MD8 QL-ELE-00-006 180 bp View
LC171819.1 nt Dual site Gateway binary vector R4p... 13543 bp Dual site Gateway binary vector R4pGWB6753-MD8 QL-ELE-00-006 180 bp View
LC171819.1 nt Dual site Gateway binary vector R4p... 13543 bp Dual site Gateway binary vector R4pGWB6753-MD8 QL-ELE-00-006 180 bp View
LC171820.1 nt Dual site Gateway binary vector R4p... 13579 bp Dual site Gateway binary vector R4pGWB6759-MD8 QL-ELE-00-006 180 bp View
LC171820.1 nt Dual site Gateway binary vector R4p... 13579 bp Dual site Gateway binary vector R4pGWB6759-MD8 QL-ELE-00-006 180 bp View
LC171821.1 nt Dual site Gateway binary vector R4p... 13390 bp Dual site Gateway binary vector R4pGWB6700-MD8-NY2 QL-ELE-00-006 180 bp View
LC171822.1 nt Dual site Gateway binary vector R4p... 13066 bp Dual site Gateway binary vector R4pGWB6700-MD8-CY2 QL-ELE-00-006 180 bp View
LC171823.1 nt Gateway binary vector R5R6pGWB401 D... 10658 bp Gateway binary vector R5R6pGWB401 QL-ELE-00-006 180 bp View
LC171825.1 nt Gateway binary vector R5R6pGWB601 D... 10514 bp Gateway binary vector R5R6pGWB601 QL-ELE-00-006 180 bp View
LC171826.1 nt Gateway binary vector R5R6pGWB701 D... 11136 bp Gateway binary vector R5R6pGWB701 QL-ELE-00-006 180 bp View
AB830536.1 nt Gateway vector pcCGGW DNA, complete... 6192 bp Gateway vector pcCGGW QL-ELE-00-006 180 bp View
AB830537.1 nt Gateway vector pcRGW DNA, complete ... 6237 bp Gateway vector pcRGW QL-ELE-00-006 180 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.