Amplicon details

Amplicon:

180 bp
1     gaatcctgtt gccggtcttg cgatgattat catataattt ctgttgaatt
51    acgttaagca tgtaataatt aacatgtaat gcatgacgtt atttatgaga
101   tgggttttta tgattagagt cccgcaatta tacatttaat acgcgataga
151   aaacaaaata tagcgcgcaa actaggataa  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
LC171800.1 nt Dual site Gateway binary vector R4p... 12960 bp Dual site Gateway binary vector R4pGWB6650-MD8 QL-ELE-00-006 180 bp View
LC171801.1 nt Dual site Gateway binary vector R4p... 12921 bp Dual site Gateway binary vector R4pGWB6653-MD8 QL-ELE-00-006 180 bp View
LC171802.1 nt Dual site Gateway binary vector R4p... 12957 bp Dual site Gateway binary vector R4pGWB6659-MD8 QL-ELE-00-006 180 bp View
LC171802.1 nt Dual site Gateway binary vector R4p... 12957 bp Dual site Gateway binary vector R4pGWB6659-MD8 QL-ELE-00-006 180 bp View
LC171803.1 nt Dual site Gateway binary vector R4p... 12768 bp Dual site Gateway binary vector R4pGWB6600-MD8-NY2 QL-ELE-00-006 180 bp View
LC171803.1 nt Dual site Gateway binary vector R4p... 12768 bp Dual site Gateway binary vector R4pGWB6600-MD8-NY2 QL-ELE-00-006 180 bp View
LC171804.1 nt Dual site Gateway binary vector R4p... 12444 bp Dual site Gateway binary vector R4pGWB6600-MD8-CY2 QL-ELE-00-006 180 bp View
LC171804.1 nt Dual site Gateway binary vector R4p... 12444 bp Dual site Gateway binary vector R4pGWB6600-MD8-CY2 QL-ELE-00-006 180 bp View
LC171805.1 nt Dual site Gateway binary vector R4p... 12865 bp Dual site Gateway binary vector R4pGWB6701-MD8 QL-ELE-00-006 180 bp View
LC171805.1 nt Dual site Gateway binary vector R4p... 12865 bp Dual site Gateway binary vector R4pGWB6701-MD8 QL-ELE-00-006 180 bp View
LC171806.1 nt Dual site Gateway binary vector R4p... 13594 bp Dual site Gateway binary vector R4pGWB6704-MD8 QL-ELE-00-006 180 bp View
LC171806.1 nt Dual site Gateway binary vector R4p... 13594 bp Dual site Gateway binary vector R4pGWB6704-MD8 QL-ELE-00-006 180 bp View
LC171807.1 nt Dual site Gateway binary vector R4p... 12883 bp Dual site Gateway binary vector R4pGWB6707-MD8 QL-ELE-00-006 180 bp View
LC171808.1 nt Dual site Gateway binary vector R4p... 12889 bp Dual site Gateway binary vector R4pGWB6710-MD8 QL-ELE-00-006 180 bp View
LC171808.1 nt Dual site Gateway binary vector R4p... 12889 bp Dual site Gateway binary vector R4pGWB6710-MD8 QL-ELE-00-006 180 bp View
LC171809.1 nt Dual site Gateway binary vector R4p... 12985 bp Dual site Gateway binary vector R4pGWB6713-MD8 QL-ELE-00-006 180 bp View
LC171809.1 nt Dual site Gateway binary vector R4p... 12985 bp Dual site Gateway binary vector R4pGWB6713-MD8 QL-ELE-00-006 180 bp View
LC171810.1 nt Dual site Gateway binary vector R4p... 13036 bp Dual site Gateway binary vector R4pGWB6716-MD8 QL-ELE-00-006 180 bp View
LC171810.1 nt Dual site Gateway binary vector R4p... 13036 bp Dual site Gateway binary vector R4pGWB6716-MD8 QL-ELE-00-006 180 bp View
LC171811.1 nt Dual site Gateway binary vector R4p... 13267 bp Dual site Gateway binary vector R4pGWB6719-MD8 QL-ELE-00-006 180 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.