Amplicon details

Amplicon:

180 bp
1     gaatcctgtt gccggtcttg cgatgattat catataattt ctgttgaatt
51    acgttaagca tgtaataatt aacatgtaat gcatgacgtt atttatgaga
101   tgggttttta tgattagagt cccgcaatta tacatttaat acgcgataga
151   aaacaaaata tagcgcgcaa actaggataa  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
LC171790.1 nt Dual site Gateway binary vector R4p... 12267 bp Dual site Gateway binary vector R4pGWB6610-MD8 QL-ELE-00-006 180 bp View
LC171790.1 nt Dual site Gateway binary vector R4p... 12267 bp Dual site Gateway binary vector R4pGWB6610-MD8 QL-ELE-00-006 180 bp View
LC171791.1 nt Dual site Gateway binary vector R4p... 12363 bp Dual site Gateway binary vector R4pGWB6613-MD8 QL-ELE-00-006 180 bp View
LC171791.1 nt Dual site Gateway binary vector R4p... 12363 bp Dual site Gateway binary vector R4pGWB6613-MD8 QL-ELE-00-006 180 bp View
LC171792.1 nt Dual site Gateway binary vector R4p... 12414 bp Dual site Gateway binary vector R4pGWB6616-MD8 QL-ELE-00-006 180 bp View
LC171793.1 nt Dual site Gateway binary vector R4p... 12645 bp Dual site Gateway binary vector R4pGWB6619-MD8 QL-ELE-00-006 180 bp View
LC171793.1 nt Dual site Gateway binary vector R4p... 12645 bp Dual site Gateway binary vector R4pGWB6619-MD8 QL-ELE-00-006 180 bp View
LC171794.1 nt Dual site Gateway binary vector R4p... 12921 bp Dual site Gateway binary vector R4pGWB6622-MD8 QL-ELE-00-006 180 bp View
LC171794.1 nt Dual site Gateway binary vector R4p... 12921 bp Dual site Gateway binary vector R4pGWB6622-MD8 QL-ELE-00-006 180 bp View
LC171795.1 nt Dual site Gateway binary vector R4p... 12276 bp Dual site Gateway binary vector R4pGWB6625-MD8 QL-ELE-00-006 180 bp View
LC171795.1 nt Dual site Gateway binary vector R4p... 12276 bp Dual site Gateway binary vector R4pGWB6625-MD8 QL-ELE-00-006 180 bp View
LC171796.1 nt Dual site Gateway binary vector R4p... 14055 bp Dual site Gateway binary vector R4pGWB6633-MD8 QL-ELE-00-006 180 bp View
LC171796.1 nt Dual site Gateway binary vector R4p... 14055 bp Dual site Gateway binary vector R4pGWB6633-MD8 QL-ELE-00-006 180 bp View
LC171797.1 nt Dual site Gateway binary vector R4p... 13896 bp Dual site Gateway binary vector R4pGWB6635-MD8 QL-ELE-00-006 180 bp View
LC171797.1 nt Dual site Gateway binary vector R4p... 13896 bp Dual site Gateway binary vector R4pGWB6635-MD8 QL-ELE-00-006 180 bp View
LC171798.1 nt Dual site Gateway binary vector R4p... 12960 bp Dual site Gateway binary vector R4pGWB6640-MD8 QL-ELE-00-006 180 bp View
LC171798.1 nt Dual site Gateway binary vector R4p... 12960 bp Dual site Gateway binary vector R4pGWB6640-MD8 QL-ELE-00-006 180 bp View
LC171799.1 nt Dual site Gateway binary vector R4p... 12960 bp Dual site Gateway binary vector R4pGWB6643-MD8 QL-ELE-00-006 180 bp View
LC171799.1 nt Dual site Gateway binary vector R4p... 12960 bp Dual site Gateway binary vector R4pGWB6643-MD8 QL-ELE-00-006 180 bp View
LC171800.1 nt Dual site Gateway binary vector R4p... 12960 bp Dual site Gateway binary vector R4pGWB6650-MD8 QL-ELE-00-006 180 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.