Amplicon details

Amplicon:

180 bp
1     gaatcctgtt gccggtcttg cgatgattat catataattt ctgttgaatt
51    acgttaagca tgtaataatt aacatgtaat gcatgacgtt atttatgaga
101   tgggttttta tgattagagt cccgcaatta tacatttaat acgcgataga
151   aaacaaaata tagcgcgcaa actaggataa  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
LC171779.1 nt Dual site Gateway binary vector R4p... 14361 bp Dual site Gateway binary vector R4pGWB6535-MD8 QL-ELE-00-006 180 bp View
LC171780.1 nt Dual site Gateway binary vector R4p... 13425 bp Dual site Gateway binary vector R4pGWB6540-MD8 QL-ELE-00-006 180 bp View
LC171780.1 nt Dual site Gateway binary vector R4p... 13425 bp Dual site Gateway binary vector R4pGWB6540-MD8 QL-ELE-00-006 180 bp View
LC171781.1 nt Dual site Gateway binary vector R4p... 13425 bp Dual site Gateway binary vector R4pGWB6543-MD8 QL-ELE-00-006 180 bp View
LC171782.1 nt Dual site Gateway binary vector R4p... 13425 bp Dual site Gateway binary vector R4pGWB6550-MD8 QL-ELE-00-006 180 bp View
LC171782.1 nt Dual site Gateway binary vector R4p... 13425 bp Dual site Gateway binary vector R4pGWB6550-MD8 QL-ELE-00-006 180 bp View
LC171783.1 nt Dual site Gateway binary vector R4p... 13386 bp Dual site Gateway binary vector R4pGWB6553-MD8 QL-ELE-00-006 180 bp View
LC171783.1 nt Dual site Gateway binary vector R4p... 13386 bp Dual site Gateway binary vector R4pGWB6553-MD8 QL-ELE-00-006 180 bp View
LC171784.1 nt Dual site Gateway binary vector R4p... 13422 bp Dual site Gateway binary vector R4pGWB6559-MD8 QL-ELE-00-006 180 bp View
LC171784.1 nt Dual site Gateway binary vector R4p... 13422 bp Dual site Gateway binary vector R4pGWB6559-MD8 QL-ELE-00-006 180 bp View
LC171785.1 nt Dual site Gateway binary vector R4p... 13233 bp Dual site Gateway binary vector R4pGWB6500-MD8-NY2 QL-ELE-00-006 180 bp View
LC171786.1 nt Dual site Gateway binary vector R4p... 12909 bp Dual site Gateway binary vector R4pGWB6500-MD8-CY2 QL-ELE-00-006 180 bp View
LC171786.1 nt Dual site Gateway binary vector R4p... 12909 bp Dual site Gateway binary vector R4pGWB6500-MD8-CY2 QL-ELE-00-006 180 bp View
LF938440.1 emblrelpat JP 2016187343-A/20: Herbicide toler... 17806 bp synthetic construct QL-ELE-00-006 180 bp View
LC171787.1 nt Dual site Gateway binary vector R4p... 12243 bp Dual site Gateway binary vector R4pGWB6601-MD8 QL-ELE-00-006 180 bp View
LC171787.1 nt Dual site Gateway binary vector R4p... 12243 bp Dual site Gateway binary vector R4pGWB6601-MD8 QL-ELE-00-006 180 bp View
LC171788.1 nt Dual site Gateway binary vector R4p... 12972 bp Dual site Gateway binary vector R4pGWB6604-MD8 QL-ELE-00-006 180 bp View
LC171788.1 nt Dual site Gateway binary vector R4p... 12972 bp Dual site Gateway binary vector R4pGWB6604-MD8 QL-ELE-00-006 180 bp View
LC171789.1 nt Dual site Gateway binary vector R4p... 12261 bp Dual site Gateway binary vector R4pGWB6607-MD8 QL-ELE-00-006 180 bp View
LC171789.1 nt Dual site Gateway binary vector R4p... 12261 bp Dual site Gateway binary vector R4pGWB6607-MD8 QL-ELE-00-006 180 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.