Amplicon details

Amplicon:

180 bp
1     gaatcctgtt gccggtcttg cgatgattat catataattt ctgttgaatt
51    acgttaagca tgtaataatt aacatgtaat gcatgacgtt atttatgaga
101   tgggttttta tgattagagt cccgcaatta tacatttaat acgcgataga
151   aaacaaaata tagcgcgcaa actaggataa  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
LC122504.1 nt Gateway vector pPlatC63NN DNA, comp... 5445 bp Gateway vector pPlatC63NN QL-ELE-00-006 180 bp View
LC171769.1 nt Dual site Gateway binary vector R4p... 12708 bp Dual site Gateway binary vector R4pGWB6501-MD8 QL-ELE-00-006 180 bp View
LC171769.1 nt Dual site Gateway binary vector R4p... 12708 bp Dual site Gateway binary vector R4pGWB6501-MD8 QL-ELE-00-006 180 bp View
LC171770.1 nt Dual site Gateway binary vector R4p... 13437 bp Dual site Gateway binary vector R4pGWB6504-MD8 QL-ELE-00-006 180 bp View
LC171771.1 nt Dual site Gateway binary vector R4p... 12726 bp Dual site Gateway binary vector R4pGWB6507-MD8 QL-ELE-00-006 180 bp View
LC171771.1 nt Dual site Gateway binary vector R4p... 12726 bp Dual site Gateway binary vector R4pGWB6507-MD8 QL-ELE-00-006 180 bp View
LC171772.1 nt Dual site Gateway binary vector R4p... 12732 bp Dual site Gateway binary vector R4pGWB6510-MD8 QL-ELE-00-006 180 bp View
LC171772.1 nt Dual site Gateway binary vector R4p... 12732 bp Dual site Gateway binary vector R4pGWB6510-MD8 QL-ELE-00-006 180 bp View
LC171773.1 nt Dual site Gateway binary vector R4p... 12828 bp Dual site Gateway binary vector R4pGWB6513-MD8 QL-ELE-00-006 180 bp View
LC171773.1 nt Dual site Gateway binary vector R4p... 12828 bp Dual site Gateway binary vector R4pGWB6513-MD8 QL-ELE-00-006 180 bp View
LC171774.1 nt Dual site Gateway binary vector R4p... 12879 bp Dual site Gateway binary vector R4pGWB6516-MD8 QL-ELE-00-006 180 bp View
LC171775.1 nt Dual site Gateway binary vector R4p... 13110 bp Dual site Gateway binary vector R4pGWB6519-MD8 QL-ELE-00-006 180 bp View
LC171775.1 nt Dual site Gateway binary vector R4p... 13110 bp Dual site Gateway binary vector R4pGWB6519-MD8 QL-ELE-00-006 180 bp View
LC171776.1 nt Dual site Gateway binary vector R4p... 13386 bp Dual site Gateway binary vector R4pGWB6522-MD8 QL-ELE-00-006 180 bp View
LC171776.1 nt Dual site Gateway binary vector R4p... 13386 bp Dual site Gateway binary vector R4pGWB6522-MD8 QL-ELE-00-006 180 bp View
LC171777.1 nt Dual site Gateway binary vector R4p... 12741 bp Dual site Gateway binary vector R4pGWB6525-MD8 QL-ELE-00-006 180 bp View
LC171777.1 nt Dual site Gateway binary vector R4p... 12741 bp Dual site Gateway binary vector R4pGWB6525-MD8 QL-ELE-00-006 180 bp View
LC171778.1 nt Dual site Gateway binary vector R4p... 14520 bp Dual site Gateway binary vector R4pGWB6533-MD8 QL-ELE-00-006 180 bp View
LC171778.1 nt Dual site Gateway binary vector R4p... 14520 bp Dual site Gateway binary vector R4pGWB6533-MD8 QL-ELE-00-006 180 bp View
LC171779.1 nt Dual site Gateway binary vector R4p... 14361 bp Dual site Gateway binary vector R4pGWB6535-MD8 QL-ELE-00-006 180 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.