Amplicon details

Amplicon:

180 bp
1     gaatcctgtt gccggtcttg cgatgattat catataattt ctgttgaatt
51    acgttaagca tgtaataatt aacatgtaat gcatgacgtt atttatgaga
101   tgggttttta tgattagagt cccgcaatta tacatttaat acgcgataga
151   aaacaaaata tagcgcgcaa actaggataa  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
LC171752.1 nt Dual site Gateway binary vector R4p... 13116 bp Dual site Gateway binary vector R4pGWB6404-MD8 QL-ELE-00-006 180 bp View
LC171753.1 nt Dual site Gateway binary vector R4p... 12405 bp Dual site Gateway binary vector R4pGWB6407-MD8 QL-ELE-00-006 180 bp View
LC171754.1 nt Dual site Gateway binary vector R4p... 12411 bp Dual site Gateway binary vector R4pGWB6410-MD8 QL-ELE-00-006 180 bp View
LC171755.1 nt Dual site Gateway binary vector R4p... 12507 bp Dual site Gateway binary vector R4pGWB6413-MD8 QL-ELE-00-006 180 bp View
LC171755.1 nt Dual site Gateway binary vector R4p... 12507 bp Dual site Gateway binary vector R4pGWB6413-MD8 QL-ELE-00-006 180 bp View
LC171756.1 nt Dual site Gateway binary vector R4p... 12558 bp Dual site Gateway binary vector R4pGWB6416-MD8 QL-ELE-00-006 180 bp View
LC171756.1 nt Dual site Gateway binary vector R4p... 12558 bp Dual site Gateway binary vector R4pGWB6416-MD8 QL-ELE-00-006 180 bp View
LC171757.1 nt Dual site Gateway binary vector R4p... 12789 bp Dual site Gateway binary vector R4pGWB6419-MD8 QL-ELE-00-006 180 bp View
LC171757.1 nt Dual site Gateway binary vector R4p... 12789 bp Dual site Gateway binary vector R4pGWB6419-MD8 QL-ELE-00-006 180 bp View
LC171758.1 nt Dual site Gateway binary vector R4p... 13065 bp Dual site Gateway binary vector R4pGWB6422-MD8 QL-ELE-00-006 180 bp View
LC171758.1 nt Dual site Gateway binary vector R4p... 13065 bp Dual site Gateway binary vector R4pGWB6422-MD8 QL-ELE-00-006 180 bp View
LC171759.1 nt Dual site Gateway binary vector R4p... 12420 bp Dual site Gateway binary vector R4pGWB6425-MD8 QL-ELE-00-006 180 bp View
LC171759.1 nt Dual site Gateway binary vector R4p... 12420 bp Dual site Gateway binary vector R4pGWB6425-MD8 QL-ELE-00-006 180 bp View
LC171760.1 nt Dual site Gateway binary vector R4p... 14199 bp Dual site Gateway binary vector R4pGWB6433-MD8 QL-ELE-00-006 180 bp View
LC171760.1 nt Dual site Gateway binary vector R4p... 14199 bp Dual site Gateway binary vector R4pGWB6433-MD8 QL-ELE-00-006 180 bp View
LC171761.1 nt Dual site Gateway binary vector R4p... 14040 bp Dual site Gateway binary vector R4pGWB6435-MD8 QL-ELE-00-006 180 bp View
LC171761.1 nt Dual site Gateway binary vector R4p... 14040 bp Dual site Gateway binary vector R4pGWB6435-MD8 QL-ELE-00-006 180 bp View
LC171762.1 nt Dual site Gateway binary vector R4p... 13104 bp Dual site Gateway binary vector R4pGWB6440-MD8 QL-ELE-00-006 180 bp View
LC171762.1 nt Dual site Gateway binary vector R4p... 13104 bp Dual site Gateway binary vector R4pGWB6440-MD8 QL-ELE-00-006 180 bp View
LC171763.1 nt Dual site Gateway binary vector R4p... 13104 bp Dual site Gateway binary vector R4pGWB6443-MD8 QL-ELE-00-006 180 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.