Amplicon details

Amplicon:

180 bp
1     gaatcctgtt gccggtcttg cgatgattat catataattt ctgttgaatt
51    acgttaagca tgtaataatt aacatgtaat gcatgacgtt atttatgaga
101   tgggttttta tgattagagt cccgcaatta tacatttaat acgcgataga
151   aaacaaaata tagcgcgcaa actaggataa  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
LC171734.1 nt Gateway destination donor vector R4... 7625 bp Gateway destination donor vector R4pDD604-MD8 QL-ELE-00-006 180 bp View
LC171735.1 nt Gateway destination donor vector R4... 6914 bp Gateway destination donor vector R4pDD607-MD8 QL-ELE-00-006 180 bp View
LC171736.1 nt Gateway destination donor vector R4... 6920 bp Gateway destination donor vector R4pDD610-MD8 QL-ELE-00-006 180 bp View
LC171737.1 nt Gateway destination donor vector R4... 7016 bp Gateway destination donor vector R4pDD613-MD8 QL-ELE-00-006 180 bp View
LC171738.1 nt Gateway destination donor vector R4... 7067 bp Gateway destination donor vector R4pDD616-MD8 QL-ELE-00-006 180 bp View
LC171739.1 nt Gateway destination donor vector R4... 7298 bp Gateway destination donor vector R4pDD619-MD8 QL-ELE-00-006 180 bp View
LC171740.1 nt Gateway destination donor vector R4... 7574 bp Gateway destination donor vector R4pDD622-MD8 QL-ELE-00-006 180 bp View
LC171741.1 nt Gateway destination donor vector R4... 6929 bp Gateway destination donor vector R4pDD625-MD8 QL-ELE-00-006 180 bp View
LC171742.1 nt Gateway destination donor vector R4... 8708 bp Gateway destination donor vector R4pDD633-MD8 QL-ELE-00-006 180 bp View
LC171743.1 nt Gateway destination donor vector R4... 8549 bp Gateway destination donor vector R4pDD635-MD8 QL-ELE-00-006 180 bp View
LC171744.1 nt Gateway destination donor vector R4... 7613 bp Gateway destination donor vector R4pDD640-MD8 QL-ELE-00-006 180 bp View
LC171745.1 nt Gateway destination donor vector R4... 7613 bp Gateway destination donor vector R4pDD643-MD8 QL-ELE-00-006 180 bp View
LC171746.1 nt Gateway destination donor vector R4... 7613 bp Gateway destination donor vector R4pDD650-MD8 QL-ELE-00-006 180 bp View
LC171747.1 nt Gateway destination donor vector R4... 7574 bp Gateway destination donor vector R4pDD653-MD8 QL-ELE-00-006 180 bp View
LC171748.1 nt Gateway destination donor vector R4... 7610 bp Gateway destination donor vector R4pDD659-MD8 QL-ELE-00-006 180 bp View
LC171749.1 nt Gateway destination donor vector R4... 7421 bp Gateway destination donor vector R4pDD600-MD8-NY2 QL-ELE-00-006 180 bp View
LC171750.1 nt Gateway destination donor vector R4... 7097 bp Gateway destination donor vector R4pDD600-MD8-CY2 QL-ELE-00-006 180 bp View
LC171751.1 nt Dual site Gateway binary vector R4p... 12387 bp Dual site Gateway binary vector R4pGWB6401-MD8 QL-ELE-00-006 180 bp View
LC171751.1 nt Dual site Gateway binary vector R4p... 12387 bp Dual site Gateway binary vector R4pGWB6401-MD8 QL-ELE-00-006 180 bp View
LC171752.1 nt Dual site Gateway binary vector R4p... 13116 bp Dual site Gateway binary vector R4pGWB6404-MD8 QL-ELE-00-006 180 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.