Amplicon details

Amplicon:

180 bp
1     gaatcctgtt gccggtcttg cgatgattat catataattt ctgttgaatt
51    acgttaagca tgtaataatt aacatgtaat gcatgacgtt atttatgaga
101   tgggttttta tgattagagt cccgcaatta tacatttaat acgcgataga
151   aaacaaaata tagcgcgcaa actaggataa  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
ON773610.1 nt Binary vector pFGC-proCas9 GBSS tar... 13733 bp Binary vector pFGC-proCas9 QL-ELE-00-006 180 bp View
ON773611.1 nt Binary vector pFGC-proCas9 PPO targ... 13733 bp Binary vector pFGC-proCas9 QL-ELE-00-006 180 bp View
ON773612.1 nt Binary vector pFGC-proCas9 PMT targ... 13733 bp Binary vector pFGC-proCas9 QL-ELE-00-006 180 bp View
ON773613.1 nt Binary vector pFGC-proCas9 FATB tar... 13732 bp Binary vector pFGC-proCas9 QL-ELE-00-006 180 bp View
JC529658.1 emblrelpat Sequence 104 from Patent EP2730656. 5303 bp synthetic construct QL-ELE-00-006 180 bp View
KT948986.1 nt Binary vector with BdPMT Bradi2g369... 16463 bp Binary vector with BdPMT Bradi2g36910 promoter QL-ELE-00-006 180 bp View
KT948987.1 nt Binary vector with BdCESA7 promoter... 15847 bp Binary vector with BdCESA7 promoter QL-ELE-00-006 180 bp View
KR997564.1 nt Binary vector pAPn, complete sequence. 10530 bp Binary vector pAPn QL-ELE-00-006 180 bp View
KU213970.1 nt Binary vector pBAtC, complete sequence. 13805 bp Binary vector pBAtC QL-ELE-00-006 180 bp View
KU213971.1 nt Binary vector pHAtC, complete sequence. 14451 bp Binary vector pHAtC QL-ELE-00-006 180 bp View
OQ418153.1 nt Synthetic construct clone pJF1271, ... 6152 bp synthetic construct QL-ELE-00-006 180 bp View
JC614302.1 emblrelpat Sequence 83 from Patent EP2761003. 13590 bp synthetic construct QL-ELE-00-006 180 bp View
KU705395.1 nt Cloning vector pNB1, complete sequence. 4813 bp Cloning vector pNB1 QL-ELE-00-006 180 bp View
JC740240.1 emblrelpat Sequence 10 from Patent EP2760882. 2034 bp synthetic construct QL-ELE-00-006 180 bp View
KT992772.1 nt Cloning vector pCTAG7, complete seq... 11050 bp Cloning vector pCTAG7 QL-ELE-00-006 180 bp View
KT954098.1 nt Cloning vector p4305.1, complete se... 10900 bp Cloning vector p4305.1 QL-ELE-00-006 180 bp View
JC991476.1 emblrelpat Sequence 48 from Patent EP2790708. 1672 bp synthetic construct QL-ELE-00-006 180 bp View
LT724965.1 nt Gateway expression vector pAGRIKOLA... 9509 bp Gateway expression vector pAGRIKOLA-CATMA2a01150 QL-ELE-00-006 180 bp View
KU221167.1 nt Binary vector pYBA-1101, complete s... 5430 bp Binary vector pYBA-1101 QL-ELE-00-006 180 bp View
KU221168.1 nt Binary vector pYBA-1102, complete s... 5839 bp Binary vector pYBA-1102 QL-ELE-00-006 180 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.