Amplicon details

Amplicon:

180 bp
1     gaatcctgtt gccggtcttg cgatgattat catataattt ctgttgaatt
51    acgttaagca tgtaataatt aacatgtaat gcatgacgtt atttatgaga
101   tgggttttta tgattagagt cccgcaatta tacatttaat acgcgataga
151   aaacaaaata tagcgcgcaa actaggataa  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
OQ632788.1 nt Cloning vector 35S-VP16-GWY/pAM, co... 7327 bp Cloning vector 35S-VP16-GWY/pAM QL-ELE-00-006 180 bp View
KT827738.1 nt Synthetic construct GMCas9 (GMCas9)... 5263 bp synthetic construct QL-ELE-00-006 180 bp View
LC094270.1 nt Gateway recycling vector pRED56-MD8... 7733 bp Gateway recycling vector pRED56-MD8-01 QL-ELE-00-006 180 bp View
LC094271.1 nt Gateway recycling vector pRED56-MD8... 8018 bp Gateway recycling vector pRED56-MD8-Pnos-02 QL-ELE-00-006 180 bp View
LC094272.1 nt Gateway recycling vector pRED56-MD8... 8440 bp Gateway recycling vector pRED56-MD8-04 QL-ELE-00-006 180 bp View
LC094273.1 nt Gateway recycling vector pRED56-MD8... 8747 bp Gateway recycling vector pRED56-MD8-Pnos-05 QL-ELE-00-006 180 bp View
LC094274.1 nt Gateway recycling vector pRED56-MD8... 8740 bp Gateway recycling vector pRED56-MD8-Pnos-06 QL-ELE-00-006 180 bp View
LC094275.1 nt Gateway recycling vector pRED56-MD8... 7751 bp Gateway recycling vector pRED56-MD8-07 QL-ELE-00-006 180 bp View
LC094276.1 nt Gateway recycling vector pRED56-MD8... 8036 bp Gateway recycling vector pRED56-MD8-Pnos-08 QL-ELE-00-006 180 bp View
JC182393.1 emblrelpat Sequence 27 from Patent EP2501219. 1290 bp synthetic construct QL-ELE-00-006 180 bp View
LC094278.1 nt Gateway recycling vector pRED56-MD8... 7757 bp Gateway recycling vector pRED56-MD8-10 QL-ELE-00-006 180 bp View
LC094279.1 nt Gateway recycling vector pRED56-MD8... 8042 bp Gateway recycling vector pRED56-MD8-Pnos-11 QL-ELE-00-006 180 bp View
JC182401.1 emblrelpat Sequence 35 from Patent EP2501219. 3472 bp synthetic construct QL-ELE-00-006 180 bp View
LC094280.1 nt Gateway recycling vector pRED56-MD8... 8044 bp Gateway recycling vector pRED56-MD8-Pnos-12 QL-ELE-00-006 180 bp View
LC094281.1 nt Gateway recycling vector pRED56-MD8... 7853 bp Gateway recycling vector pRED56-MD8-13 QL-ELE-00-006 180 bp View
LC094282.1 nt Gateway recycling vector pRED56-MD8... 8138 bp Gateway recycling vector pRED56-MD8-Pnos-14 QL-ELE-00-006 180 bp View
LC094283.1 nt Gateway recycling vector pRED56-MD8... 8140 bp Gateway recycling vector pRED56-MD8-Pnos-15 QL-ELE-00-006 180 bp View
LC094284.1 nt Gateway recycling vector pRED56-MD8... 7889 bp Gateway recycling vector pRED56-MD8-16 QL-ELE-00-006 180 bp View
LC094285.1 nt Gateway recycling vector pRED56-MD8... 8189 bp Gateway recycling vector pRED56-MD8-Pnos-17 QL-ELE-00-006 180 bp View
JC200965.1 emblrelpat Sequence 31 from Patent EP2504429. 8885 bp synthetic construct QL-ELE-00-006 180 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.