Amplicon details

Amplicon:

180 bp
1     gaatcctgtt gccggtcttg cgatgattat catataattt ctgttgaatt
51    acgttaagca tgtaataatt aacatgtaat gcatgacgtt atttatgaga
101   tgggttttta tgattagagt cccgcaatta tacatttaat acgcgataga
151   aaacaaaata tagcgcgcaa actaggataa  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
LC094302.1 nt Gateway recycling vector pRED56-MD8... 8735 bp Gateway recycling vector pRED56-MD8-Pnos-44 QL-ELE-00-006 180 bp View
LC094303.1 nt Gateway recycling vector pRED56-MD8... 8737 bp Gateway recycling vector pRED56-MD8-Pnos-45 QL-ELE-00-006 180 bp View
LC094304.1 nt Gateway recycling vector pRED56-MD8... 8450 bp Gateway recycling vector pRED56-MD8-50 QL-ELE-00-006 180 bp View
LC094305.1 nt Gateway recycling vector pRED56-MD8... 8735 bp Gateway recycling vector pRED56-MD8-Pnos-51 QL-ELE-00-006 180 bp View
LC094306.1 nt Gateway recycling vector pRED56-MD8... 8734 bp Gateway recycling vector pRED56-MD8-Pnos-52 QL-ELE-00-006 180 bp View
LC094307.1 nt Gateway recycling vector pRED56-MD8... 8411 bp Gateway recycling vector pRED56-MD8-53 QL-ELE-00-006 180 bp View
LC094308.1 nt Gateway recycling vector pRED56-MD8... 8696 bp Gateway recycling vector pRED56-MD8-Pnos-54 QL-ELE-00-006 180 bp View
LC094309.1 nt Gateway recycling vector pRED56-MD8... 8695 bp Gateway recycling vector pRED56-MD8-Pnos-55 QL-ELE-00-006 180 bp View
LC094310.1 nt Gateway recycling vector pRED56-MD8... 8447 bp Gateway recycling vector pRED56-MD8-59 QL-ELE-00-006 180 bp View
LC094311.1 nt Gateway recycling vector pRED56-MD8... 8732 bp Gateway recycling vector pRED56-MD8-Pnos-60 QL-ELE-00-006 180 bp View
LC094312.1 nt Gateway recycling vector pRED56-MD8... 8731 bp Gateway recycling vector pRED56-MD8-Pnos-61 QL-ELE-00-006 180 bp View
LC094313.1 nt Gateway recycling vector pRED56-MD8... 8258 bp Gateway recycling vector pRED56-MD8-NY2 QL-ELE-00-006 180 bp View
LC094314.1 nt Gateway recycling vector pRED56-MD8... 7934 bp Gateway recycling vector pRED56-MD8-CY2 QL-ELE-00-006 180 bp View
LC094315.1 nt Gateway recycling vector pRED56-MD8... 8543 bp Gateway recycling vector pRED56-MD8-Pnos-NY2 QL-ELE-00-006 180 bp View
LC094316.1 nt Gateway recycling vector pRED56-MD8... 8219 bp Gateway recycling vector pRED56-MD8-Pnos-CY2 QL-ELE-00-006 180 bp View
LC094317.1 nt Gateway recycling vector pRED56-MD8... 8542 bp Gateway recycling vector pRED56-MD8-Pnos-NY0 QL-ELE-00-006 180 bp View
LC094318.1 nt Gateway recycling vector pRED56-MD8... 8218 bp Gateway recycling vector pRED56-MD8-Pnos-CY0 QL-ELE-00-006 180 bp View
LC094319.1 nt Gateway recycling vector pRED56-MD8... 11276 bp Gateway recycling vector pRED56-MD8-Pnos-Fluc-35SRluc QL-ELE-00-006 180 bp View
LC094320.1 nt Gateway recycling vector pRED56-MD8... 11654 bp Gateway recycling vector pRED56-MD8-Pnos-Flucin-35SRlucin QL-ELE-00-006 180 bp View
LC094322.1 nt Gateway recycling vector R4pRED56-M... 8448 bp Gateway recycling vector R4pRED56-MD8-04-R4R2R1R3 QL-ELE-00-006 180 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.