Amplicon details

Amplicon:

180 bp
1     gaatcctgtt gccggtcttg cgatgattat catataattt ctgttgaatt
51    acgttaagca tgtaataatt aacatgtaat gcatgacgtt atttatgaga
101   tgggttttta tgattagagt cccgcaatta tacatttaat acgcgataga
151   aaacaaaata tagcgcgcaa actaggataa  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
LC094283.1 nt Gateway recycling vector pRED56-MD8... 8140 bp Gateway recycling vector pRED56-MD8-Pnos-15 QL-ELE-00-006 180 bp View
LC094284.1 nt Gateway recycling vector pRED56-MD8... 7889 bp Gateway recycling vector pRED56-MD8-16 QL-ELE-00-006 180 bp View
LC094285.1 nt Gateway recycling vector pRED56-MD8... 8189 bp Gateway recycling vector pRED56-MD8-Pnos-17 QL-ELE-00-006 180 bp View
JC200965.1 emblrelpat Sequence 31 from Patent EP2504429. 8885 bp synthetic construct QL-ELE-00-006 180 bp View
LC094286.1 nt Gateway recycling vector pRED56-MD8... 8191 bp Gateway recycling vector pRED56-MD8-Pnos-18 QL-ELE-00-006 180 bp View
LC094287.1 nt Gateway recycling vector pRED56-MD8... 8120 bp Gateway recycling vector pRED56-MD8-19 QL-ELE-00-006 180 bp View
LC094288.1 nt Gateway recycling vector pRED56-MD8... 8420 bp Gateway recycling vector pRED56-MD8-Pnos-20 QL-ELE-00-006 180 bp View
LC094289.1 nt Gateway recycling vector pRED56-MD8... 8425 bp Gateway recycling vector pRED56-MD8-Pnos-21 QL-ELE-00-006 180 bp View
LC094290.1 nt Gateway recycling vector pRED56-MD8... 8396 bp Gateway recycling vector pRED56-MD8-22 QL-ELE-00-006 180 bp View
LC094291.1 nt Gateway recycling vector pRED56-MD8... 8696 bp Gateway recycling vector pRED56-MD8-Pnos-23 QL-ELE-00-006 180 bp View
LC094292.1 nt Gateway recycling vector pRED56-MD8... 8698 bp Gateway recycling vector pRED56-MD8-Pnos-24 QL-ELE-00-006 180 bp View
LC094293.1 nt Gateway recycling vector pRED56-MD8... 7751 bp Gateway recycling vector pRED56-MD8-25 QL-ELE-00-006 180 bp View
LC094294.1 nt Gateway recycling vector pRED56-MD8... 8051 bp Gateway recycling vector pRED56-MD8-Pnos-26 QL-ELE-00-006 180 bp View
LC094295.1 nt Gateway recycling vector pRED56-MD8... 8053 bp Gateway recycling vector pRED56-MD8-Pnos-27 QL-ELE-00-006 180 bp View
LC094296.1 nt Gateway recycling vector pRED56-MD8... 9545 bp Gateway recycling vector pRED56-MD8-33 QL-ELE-00-006 180 bp View
LC094297.1 nt Gateway recycling vector pRED56-MD8... 9386 bp Gateway recycling vector pRED56-MD8-35 QL-ELE-00-006 180 bp View
LC094298.1 nt Gateway recycling vector pRED56-MD8... 8450 bp Gateway recycling vector pRED56-MD8-40 QL-ELE-00-006 180 bp View
LC094299.1 nt Gateway recycling vector pRED56-MD8... 8735 bp Gateway recycling vector pRED56-MD8-Pnos-41 QL-ELE-00-006 180 bp View
LC094300.1 nt Gateway recycling vector pRED56-MD8... 8737 bp Gateway recycling vector pRED56-MD8-Pnos-42 QL-ELE-00-006 180 bp View
LC094301.1 nt Gateway recycling vector pRED56-MD8... 8450 bp Gateway recycling vector pRED56-MD8-43 QL-ELE-00-006 180 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.