Amplicon details

Amplicon:

180 bp
1     gaatcctgtt gccggtcttg cgatgattat catataattt ctgttgaatt
51    acgttaagca tgtaataatt aacatgtaat gcatgacgtt atttatgaga
101   tgggttttta tgattagagt cccgcaatta tacatttaat acgcgataga
151   aaacaaaata tagcgcgcaa actaggataa  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
NRN_JA279479 nrnl1 Sequence 14 from Patent WO2011008510. 15510 bp unidentified QL-ELE-00-006 180 bp View
EU327494.1 nt Transformation vector pC23HG, compl... 11396 bp Transformation vector pC23HG QL-ELE-00-006 180 bp View
NRN_CS646797 nrnl1 Sequence 52 from Patent WO200706184... 12323 bp unidentified QL-ELE-00-006 180 bp View
EU327495.1 nt Transformation vector pC23LB, compl... 10640 bp Transformation vector pC23LB QL-ELE-00-006 180 bp View
NRN_AR260585 nrnl1 Sequence 13 from patent US 6489542.... 10339 bp unidentified QL-ELE-00-006 180 bp View
AB752377.1 nt Gateway binary vector pGWB80 DNA, c... 17897 bp Gateway binary vector pGWB80 QL-ELE-00-006 180 bp View
EU327497.1 nt Binary vector pBLNSC, complete sequ... 17613 bp Binary vector pBLNSC QL-ELE-00-006 180 bp View
EU327497.1 nt Binary vector pBLNSC, complete sequ... 17613 bp Binary vector pBLNSC QL-ELE-00-006 180 bp View
NRN_GM979720 nrnl1 Sequence 124 from Patent WO20081479... 11615 bp unidentified QL-ELE-00-006 180 bp View
JX475903.1 nt IU.GUS homologous recombination rep... 6394 bp IU.GUS homologous recombination reporter construct T-DNA QL-ELE-00-006 180 bp View
EU327975.1 nt Binary vector pBLOXNPT, complete se... 14961 bp Binary vector pBLOXNPT QL-ELE-00-006 180 bp View
EU327975.1 nt Binary vector pBLOXNPT, complete se... 14961 bp Binary vector pBLOXNPT QL-ELE-00-006 180 bp View
NRN_JA470493 nrnl1 Sequence 36 from Patent WO2011079005. 14769 bp unidentified QL-ELE-00-006 180 bp View
JX475905.1 nt DU.GUS homologous recombination rep... 6396 bp DU.GUS homologous recombination reporter construct T-DNA QL-ELE-00-006 180 bp View
EU327976.1 nt Binary vector pBCRE, complete sequence. 14147 bp Binary vector pBCRE QL-ELE-00-006 180 bp View
EU327976.1 nt Binary vector pBCRE, complete sequence. 14147 bp Binary vector pBCRE QL-ELE-00-006 180 bp View
KC416201.1 nt Gateway vector pJan25T, complete se... 16510 bp Gateway vector pJan25T QL-ELE-00-006 180 bp View
KC416201.1 nt Gateway vector pJan25T, complete se... 16510 bp Gateway vector pJan25T QL-ELE-00-006 180 bp View
EU327977.1 nt Binary vector pCCRE, complete sequence. 11484 bp Binary vector pCCRE QL-ELE-00-006 180 bp View
OM981241.1 nt Oryza sativa Indica Group transgeni... 994 bp Oryza sativa Indica Group QL-ELE-00-006 180 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.