Amplicon details

Amplicon:

180 bp
1     gaatcctgtt gccggtcttg cgatgattat catataattt ctgttgaatt
51    acgttaagca tgtaataatt aacatgtaat gcatgacgtt atttatgaga
101   tgggttttta tgattagagt cccgcaatta tacatttaat acgcgataga
151   aaacaaaata tagcgcgcaa actaggataa  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
LT725564.1 nt Gateway expression vector pAGRIKOLA... 9523 bp Gateway expression vector pAGRIKOLA-CATMA5a36020 QL-ELE-00-007 180 bp View
AB364163.1 nt Gateway binary vector R4pGWB401 DNA... 10835 bp Gateway binary vector R4pGWB401 QL-ELE-00-007 180 bp View
AB364163.1 nt Gateway binary vector R4pGWB401 DNA... 10835 bp Gateway binary vector R4pGWB401 QL-ELE-00-007 180 bp View
LT725573.1 nt Gateway expression vector pAGRIKOLA... 9517 bp Gateway expression vector pAGRIKOLA-CATMA5a39470 QL-ELE-00-007 180 bp View
LT725582.1 nt Gateway expression vector pAGRIKOLA... 9593 bp Gateway expression vector pAGRIKOLA-CATMA5a42300 QL-ELE-00-007 180 bp View
AB364164.1 nt Gateway binary vector R4pGWB404 DNA... 11564 bp Gateway binary vector R4pGWB404 QL-ELE-00-007 180 bp View
AB364164.1 nt Gateway binary vector R4pGWB404 DNA... 11564 bp Gateway binary vector R4pGWB404 QL-ELE-00-007 180 bp View
LT725591.1 nt Gateway expression vector pAGRIKOLA... 9503 bp Gateway expression vector pAGRIKOLA-CATMA5a43250 QL-ELE-00-007 180 bp View
LT725600.1 nt Gateway expression vector pAGRIKOLA... 9655 bp Gateway expression vector pAGRIKOLA-CATMA5a45500 QL-ELE-00-007 180 bp View
AB364165.1 nt Gateway binary vector R4pGWB407 DNA... 10853 bp Gateway binary vector R4pGWB407 QL-ELE-00-007 180 bp View
AB364165.1 nt Gateway binary vector R4pGWB407 DNA... 10853 bp Gateway binary vector R4pGWB407 QL-ELE-00-007 180 bp View
LT725609.1 nt Gateway expression vector pAGRIKOLA... 9735 bp Gateway expression vector pAGRIKOLA-CATMA5a50200 QL-ELE-00-007 180 bp View
LT725618.1 nt Gateway expression vector pAGRIKOLA... 9587 bp Gateway expression vector pAGRIKOLA-CATMA5a52600 QL-ELE-00-007 180 bp View
AB364166.1 nt Gateway binary vector R4pGWB410 DNA... 10859 bp Gateway binary vector R4pGWB410 QL-ELE-00-007 180 bp View
AB364166.1 nt Gateway binary vector R4pGWB410 DNA... 10859 bp Gateway binary vector R4pGWB410 QL-ELE-00-007 180 bp View
LT725627.1 nt Gateway expression vector pAGRIKOLA... 9511 bp Gateway expression vector pAGRIKOLA-CATMA5a56160 QL-ELE-00-007 180 bp View
LT725636.1 nt Gateway expression vector pAGRIKOLA... 9935 bp Gateway expression vector pAGRIKOLA-CATMA5a60620 QL-ELE-00-007 180 bp View
AB364167.1 nt Gateway binary vector R4pGWB413 DNA... 10955 bp Gateway binary vector R4pGWB413 QL-ELE-00-007 180 bp View
AB364167.1 nt Gateway binary vector R4pGWB413 DNA... 10955 bp Gateway binary vector R4pGWB413 QL-ELE-00-007 180 bp View
AX259247.1 emblrelpat Sequence 45 from Patent WO0173087. 8849 bp synthetic construct QL-ELE-00-007 180 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.