Amplicon details

Amplicon:

180 bp
1     gaatcctgtt gccggtcttg cgatgattat catataattt ctgttgaatt
51    acgttaagca tgtaataatt aacatgtaat gcatgacgtt atttatgaga
101   tgggttttta tgattagagt cccgcaatta tacatttaat acgcgataga
151   aaacaaaata tagcgcgcaa actaggataa  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
LT725474.1 nt Gateway expression vector pAGRIKOLA... 9535 bp Gateway expression vector pAGRIKOLA-CATMA4a40092 QL-ELE-00-007 180 bp View
DQ469640.1 nt Transformation vector pYW301, compl... 15470 bp Transformation vector pYW301 QL-ELE-00-007 180 bp View
DQ469640.1 nt Transformation vector pYW301, compl... 15470 bp Transformation vector pYW301 QL-ELE-00-007 180 bp View
LT725483.1 nt Gateway expression vector pAGRIKOLA... 9535 bp Gateway expression vector pAGRIKOLA-CATMA4c42369 QL-ELE-00-007 180 bp View
DQ469641.1 nt Transformation vector pYW310, compl... 15380 bp Transformation vector pYW310 QL-ELE-00-007 180 bp View
DQ469641.1 nt Transformation vector pYW310, compl... 15380 bp Transformation vector pYW310 QL-ELE-00-007 180 bp View
LT725492.1 nt Gateway expression vector pAGRIKOLA... 9549 bp Gateway expression vector pAGRIKOLA-CATMA5a00920 QL-ELE-00-007 180 bp View
EU049865.1 nt Cloning vector pSAT5.nosP.RNAi, com... 4678 bp Cloning vector pSAT5.nosP.RNAi QL-ELE-00-007 180 bp View
LT725501.1 nt Gateway expression vector pAGRIKOLA... 9595 bp Gateway expression vector pAGRIKOLA-CATMA5a02700 QL-ELE-00-007 180 bp View
EU040203.1 nt Expression vector pLIC-C-TAP, compl... 11429 bp Expression vector pLIC-C-TAP QL-ELE-00-007 180 bp View
LT725510.1 nt Gateway expression vector pAGRIKOLA... 9487 bp Gateway expression vector pAGRIKOLA-CATMA5a06130 QL-ELE-00-007 180 bp View
EF565882.1 nt Plant expression vector pDuExAn1, c... 7306 bp Plant expression vector pDuExAn1 QL-ELE-00-007 180 bp View
LT725519.1 nt Gateway expression vector pAGRIKOLA... 9501 bp Gateway expression vector pAGRIKOLA-CATMA5a09740 QL-ELE-00-007 180 bp View
EF565883.1 nt Plant expression vector pDuExP (pDu... 7315 bp Plant expression vector pDuExP (pDuExAn6) QL-ELE-00-007 180 bp View
LT725528.1 nt Gateway expression vector pAGRIKOLA... 9507 bp Gateway expression vector pAGRIKOLA-CATMA5a12100 QL-ELE-00-007 180 bp View
EF565884.1 nt Plant expression vector pDuExB (pDu... 8358 bp Plant expression vector pDuExB (pDuExDc6) QL-ELE-00-007 180 bp View
LT725537.1 nt Gateway expression vector pAGRIKOLA... 9495 bp Gateway expression vector pAGRIKOLA-CATMA5a16090 QL-ELE-00-007 180 bp View
EF565885.1 nt Plant expression vector pDuExB2 (pD... 8643 bp Plant expression vector pDuExB2 (pDuExD7) QL-ELE-00-007 180 bp View
LT725546.1 nt Gateway expression vector pAGRIKOLA... 9447 bp Gateway expression vector pAGRIKOLA-CATMA5a20625 QL-ELE-00-007 180 bp View
LT725555.1 nt Gateway expression vector pAGRIKOLA... 9935 bp Gateway expression vector pAGRIKOLA-CATMA5a23500 QL-ELE-00-007 180 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.