Amplicon details

Amplicon:

180 bp
1     gaatcctgtt gccggtcttg cgatgattat catataattt ctgttgaatt
51    acgttaagca tgtaataatt aacatgtaat gcatgacgtt atttatgaga
101   tgggttttta tgattagagt cccgcaatta tacatttaat acgcgataga
151   aaacaaaata tagcgcgcaa actaggataa  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
LT725014.1 nt Gateway expression vector pAGRIKOLA... 9583 bp Gateway expression vector pAGRIKOLA-CATMA2a12780 QL-ELE-00-007 180 bp View
AB294473.1 nt Gateway binary vector pGWB506 DNA, ... 12728 bp Gateway binary vector pGWB506 QL-ELE-00-007 180 bp View
AB294473.1 nt Gateway binary vector pGWB506 DNA, ... 12728 bp Gateway binary vector pGWB506 QL-ELE-00-007 180 bp View
LT725023.1 nt Gateway expression vector pAGRIKOLA... 9481 bp Gateway expression vector pAGRIKOLA-CATMA2a13250 QL-ELE-00-007 180 bp View
LT725032.1 nt Gateway expression vector pAGRIKOLA... 9867 bp Gateway expression vector pAGRIKOLA-CATMA2a13430 QL-ELE-00-007 180 bp View
AB294474.1 nt Gateway binary vector pGWB507 DNA, ... 11183 bp Gateway binary vector pGWB507 QL-ELE-00-007 180 bp View
KP100658.1 nt Binary vector pYBA-1129, complete s... 7090 bp Binary vector pYBA-1129 QL-ELE-00-007 180 bp View
LT725041.1 nt Gateway expression vector pAGRIKOLA... 9897 bp Gateway expression vector pAGRIKOLA-CATMA2a13570 QL-ELE-00-007 180 bp View
EF515874.1 nt Gateway binary vector pKPFWG2, comp... 11539 bp Gateway binary vector pKPFWG2 QL-ELE-00-007 180 bp View
LT725647.1 nt Gateway expression vector pAGRIKOLA... 9481 bp Gateway expression vector pAGRIKOLA-CATMA5c64002 QL-ELE-00-007 180 bp View
EF515875.1 nt Gateway binary vector pKPWGF2, comp... 11535 bp Gateway binary vector pKPWGF2 QL-ELE-00-007 180 bp View
LT725656.1 nt Gateway expression vector pAGRIKOLA... 9441 bp Gateway expression vector pAGRIKOLA-CATMA5c64727 QL-ELE-00-007 180 bp View
LT725339.1 nt Gateway expression vector pAGRIKOLA... 9503 bp Gateway expression vector pAGRIKOLA-CATMA4a00130 QL-ELE-00-007 180 bp View
LT725348.1 nt Gateway expression vector pAGRIKOLA... 9535 bp Gateway expression vector pAGRIKOLA-CATMA4a02900 QL-ELE-00-007 180 bp View
EF546437.1 nt Binary vector pGFPGUSplus, complete... 13701 bp Binary vector pGFPGUSplus QL-ELE-00-007 180 bp View
EF546437.1 nt Binary vector pGFPGUSplus, complete... 13701 bp Binary vector pGFPGUSplus QL-ELE-00-007 180 bp View
LT725357.1 nt Gateway expression vector pAGRIKOLA... 9437 bp Gateway expression vector pAGRIKOLA-CATMA4a09890 QL-ELE-00-007 180 bp View
LT725366.1 nt Gateway expression vector pAGRIKOLA... 9515 bp Gateway expression vector pAGRIKOLA-CATMA4a18060 QL-ELE-00-007 180 bp View
LT725375.1 nt Gateway expression vector pAGRIKOLA... 9483 bp Gateway expression vector pAGRIKOLA-CATMA4a18320 QL-ELE-00-007 180 bp View
DQ469634.1 nt Transformation vector pYW100b, comp... 16599 bp Transformation vector pYW100b QL-ELE-00-007 180 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.