Amplicon details

Amplicon:

180 bp
1     gaatcctgtt gccggtcttg cgatgattat catataattt ctgttgaatt
51    acgttaagca tgtaataatt aacatgtaat gcatgacgtt atttatgaga
101   tgggttttta tgattagagt cccgcaatta tacatttaat acgcgataga
151   aaacaaaata tagcgcgcaa actaggataa  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
LT725201.1 nt Gateway expression vector pAGRIKOLA... 9841 bp Gateway expression vector pAGRIKOLA-CATMA3a00460 QL-ELE-00-007 180 bp View
LT725210.1 nt Gateway expression vector pAGRIKOLA... 9781 bp Gateway expression vector pAGRIKOLA-CATMA3a05180 QL-ELE-00-007 180 bp View
AB294450.1 nt Gateway binary vector pGWB426 DNA, ... 11718 bp Gateway binary vector pGWB426 QL-ELE-00-007 180 bp View
AB294450.1 nt Gateway binary vector pGWB426 DNA, ... 11718 bp Gateway binary vector pGWB426 QL-ELE-00-007 180 bp View
LT725219.1 nt Gateway expression vector pAGRIKOLA... 10135 bp Gateway expression vector pAGRIKOLA-CATMA3a08935 QL-ELE-00-007 180 bp View
LT725228.1 nt Gateway expression vector pAGRIKOLA... 9533 bp Gateway expression vector pAGRIKOLA-CATMA3a12660 QL-ELE-00-007 180 bp View
AB294451.1 nt Gateway binary vector pGWB427 DNA, ... 11720 bp Gateway binary vector pGWB427 QL-ELE-00-007 180 bp View
AB294451.1 nt Gateway binary vector pGWB427 DNA, ... 11720 bp Gateway binary vector pGWB427 QL-ELE-00-007 180 bp View
LT725237.1 nt Gateway expression vector pAGRIKOLA... 9671 bp Gateway expression vector pAGRIKOLA-CATMA3a15680 QL-ELE-00-007 180 bp View
KM062056.1 nt Cloning vector pPLV20_v2, complete ... 5175 bp Cloning vector pPLV20_v2 QL-ELE-00-007 180 bp View
LT725246.1 nt Gateway expression vector pAGRIKOLA... 9935 bp Gateway expression vector pAGRIKOLA-CATMA3a18260 QL-ELE-00-007 180 bp View
AB294452.1 nt Gateway binary vector pGWB428 DNA, ... 11375 bp Gateway binary vector pGWB428 QL-ELE-00-007 180 bp View
AB294452.1 nt Gateway binary vector pGWB428 DNA, ... 11375 bp Gateway binary vector pGWB428 QL-ELE-00-007 180 bp View
AP018987.1 nt Gateway binary vector pGWB585 DNA, ... 11906 bp Gateway binary vector pGWB585 QL-ELE-00-007 180 bp View
LT725255.1 nt Gateway expression vector pAGRIKOLA... 9441 bp Gateway expression vector pAGRIKOLA-CATMA3a20640 QL-ELE-00-007 180 bp View
LT725264.1 nt Gateway expression vector pAGRIKOLA... 9483 bp Gateway expression vector pAGRIKOLA-CATMA3a23120 QL-ELE-00-007 180 bp View
AB294453.1 nt Gateway binary vector pGWB429 DNA, ... 12231 bp Gateway binary vector pGWB429 QL-ELE-00-007 180 bp View
AB294453.1 nt Gateway binary vector pGWB429 DNA, ... 12231 bp Gateway binary vector pGWB429 QL-ELE-00-007 180 bp View
LT725273.1 nt Gateway expression vector pAGRIKOLA... 9579 bp Gateway expression vector pAGRIKOLA-CATMA3a24780 QL-ELE-00-007 180 bp View
LT725282.1 nt Gateway expression vector pAGRIKOLA... 9697 bp Gateway expression vector pAGRIKOLA-CATMA3a37270 QL-ELE-00-007 180 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.