Amplicon details

Amplicon:

180 bp
1     gaatcctgtt gccggtcttg cgatgattat catataattt ctgttgaatt
51    acgttaagca tgtaataatt aacatgtaat gcatgacgtt atttatgaga
101   tgggttttta tgattagagt cccgcaatta tacatttaat acgcgataga
151   aaacaaaata tagcgcgcaa actaggataa  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
DQ005462.1 nt Cloning vector pSAT2A-nosP-MCS-nosT... 3289 bp Cloning vector pSAT2A-nosP-MCS-nosT QL-ELE-00-007 180 bp View
LC094304.1 nt Gateway recycling vector pRED56-MD8... 8450 bp Gateway recycling vector pRED56-MD8-50 QL-ELE-00-007 180 bp View
DQ005463.1 nt Cloning vector pSAT2-nosP-MCS-nosT,... 3295 bp Cloning vector pSAT2-nosP-MCS-nosT QL-ELE-00-007 180 bp View
LC094315.1 nt Gateway recycling vector pRED56-MD8... 8543 bp Gateway recycling vector pRED56-MD8-Pnos-NY2 QL-ELE-00-007 180 bp View
AY297842.1 nt Transformation vector pgR107, compl... 10436 bp Transformation vector pgR107 QL-ELE-00-007 180 bp View
AY297843.1 nt Transformation vector pgR106, compl... 10451 bp Transformation vector pgR106 QL-ELE-00-007 180 bp View
JB055084.1 emblrelpat Sequence 63 from Patent EP2561074. 2372 bp synthetic construct QL-ELE-00-007 180 bp View
AF406991.1 nt Tobacco rattle virus RNA2-based VIG... 9663 bp Tobacco rattle virus RNA2-based VIGS vector pTRV2 QL-ELE-00-007 180 bp View
KJ184340.1 nt Expression vector pHQRep(3X), compl... 5165 bp Expression vector pHQRep(3X) QL-ELE-00-007 180 bp View
AY436765.1 nt Binary vector pAMPAT-MCS, complete ... 5274 bp Binary vector pAMPAT-MCS QL-ELE-00-007 180 bp View
NRN_CS646845 nrnl1 Sequence 100 from Patent WO20070618... 15114 bp unidentified QL-ELE-00-007 180 bp View
AY373338.1 nt Binary vector pGA1611, complete seq... 13476 bp Binary vector pGA1611 QL-ELE-00-007 180 bp View
JA895185.1 emblrelpat Sequence 1 from Patent EP2455454. 11618 bp synthetic construct QL-ELE-00-007 180 bp View
AY452736.2 nt Reporter vector pUbiGUSPlus, comple... 7018 bp Reporter vector pUbiGUSPlus QL-ELE-00-007 180 bp View
KJ184341.1 nt Expression vector pHQRep(6X), compl... 5238 bp Expression vector pHQRep(6X) QL-ELE-00-007 180 bp View
AY529717.1 nt Cloning vector pADIS1, complete seq... 5106 bp Cloning vector pADIS1 QL-ELE-00-007 180 bp View
NRN_CS592965 nrnl1 Sequence 193 from Patent WO2007039454. 9597 bp unidentified QL-ELE-00-007 180 bp View
AY560325.1 nt Cloning vector pC1300intB-35SnosEX,... 9937 bp Cloning vector pC1300intB-35SnosEX QL-ELE-00-007 180 bp View
NRN_CS592965 nrnl1 Sequence 193 from Patent WO2007039454. 9597 bp unidentified QL-ELE-00-007 180 bp View
LC094330.1 nt Gateway recycling vector R4pRED56-M... 9543 bp Gateway recycling vector R4pRED56-MD8-33-R4R2R1R3 QL-ELE-00-007 180 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.