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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 180 bp 
1     gaatcctgtt gccggtcttg cgatgattat catataattt ctgttgaatt
51    acgttaagca tgtaataatt aacatgtaat gcatgacgtt atttatgaga
101   tgggttttta tgattagagt cccgcaatta tacatttaat acgcgataga
151   aaacaaaata tagcgcgcaa actaggataa

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
DQ225750.1 nt Gene trapping Ds/T-DNA vector pNU43... 22204 bp Gene trapping Ds/T-DNA vector pNU435 QL-ELE-00-007 180 bp View
DQ225750.1 nt Gene trapping Ds/T-DNA vector pNU43... 22204 bp Gene trapping Ds/T-DNA vector pNU435 QL-ELE-00-007 180 bp View
DQ225750.1 nt Gene trapping Ds/T-DNA vector pNU43... 22204 bp Gene trapping Ds/T-DNA vector pNU435 QL-ELE-00-007 180 bp View
DQ225750.1 nt Gene trapping Ds/T-DNA vector pNU43... 22204 bp Gene trapping Ds/T-DNA vector pNU435 QL-ELE-00-007 180 bp View
NRN_CS592963 nrnl1 Sequence 191 from Patent WO2007039454. 9628 bp unidentified QL-ELE-00-007 180 bp View
DQ225751.1 nt Immobile Ac/T-DNA vector pKU352NA, ... 18090 bp Immobile Ac/T-DNA vector pKU352NA QL-ELE-00-007 180 bp View
KR857706.1 nt BiFC expression vector pUC-triRV, c... 4199 bp BiFC expression vector pUC-triRV QL-ELE-00-007 180 bp View
DQ225752.1 nt Immobile Ac/T-DNA vector pNU400, co... 15970 bp Immobile Ac/T-DNA vector pNU400 QL-ELE-00-007 180 bp View
NRN_CQ759499 nrnl1 Sequence 15 from Patent WO2003104463. 10158 bp unidentified QL-ELE-00-007 180 bp View
U12639.1 nt GUS gene fusion vector pBI101 T-DNA... 5349 bp Cloning vector pBI101 QL-ELE-00-007 180 bp View
U12639.1 nt GUS gene fusion vector pBI101 T-DNA... 5349 bp Cloning vector pBI101 QL-ELE-00-007 180 bp View
MT670352.1 nt Cloning vector pSH179, complete seq... 9436 bp Cloning vector pSH179 QL-ELE-00-007 180 bp View
AB003141.1 nt Arabidopsis thaliana transgenic lin... 4475 bp Arabidopsis thaliana QL-ELE-00-007 180 bp View
NRN_CQ887757 nrnl1 Sequence 38 from Patent WO200406335... 17238 bp unidentified QL-ELE-00-007 180 bp View
AB003142.1 nt Arabidopsis thaliana transgenic lin... 5984 bp Arabidopsis thaliana QL-ELE-00-007 180 bp View
JA843548.1 emblrelpat Sequence 3 from Patent WO2012066147. 7957 bp synthetic construct QL-ELE-00-007 180 bp View
AJ237588.1 nt Agrobacterium tumefaciens Ti plasmi... 29524 bp Agrobacterium tumefaciens QL-ELE-00-007 180 bp View
NRN_CS448063 nrnl1 Sequence 212 from Patent WO20061115... 12587 bp unidentified QL-ELE-00-007 180 bp View
AF309825.2 nt Plant expression vector pER8, compl... 11522 bp Plant expression vector pER8 QL-ELE-00-007 180 bp View
MZ380291.1 nt Expression vector pBIN30:gMSL10-EGF... 17417 bp Expression vector pBIN30:gMSL10-EGFP QL-ELE-00-007 180 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.