Amplicon details

Amplicon:

180 bp
1     gaatcctgtt gccggtcttg cgatgattat catataattt ctgttgaatt
51    acgttaagca tgtaataatt aacatgtaat gcatgacgtt atttatgaga
101   tgggttttta tgattagagt cccgcaatta tacatttaat acgcgataga
151   aaacaaaata tagcgcgcaa actaggataa  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
AY720440.1 nt Plant expression vector pGIGI, comp... 4157 bp Plant expression vector pGIGI QL-ELE-00-006 180 bp View
NRN_CQ792397 nrnl1 Sequence 142 from Patent WO20040206... 5544 bp unidentified QL-ELE-00-006 180 bp View
AY457636.1 nt Plant binary vector pXCS-HAStrep, c... 5332 bp Plant binary vector pXCS-HAStrep QL-ELE-00-006 180 bp View
NRN_EA021599 nrnl1 Sequence 34 from patent US 7132589.... 4950 bp unidentified QL-ELE-00-006 180 bp View
AY781296.1 nt Expression vector pBI121_pro T-DNA ... 8196 bp Expression vector pBI121_pro QL-ELE-00-006 180 bp View
AY781296.1 nt Expression vector pBI121_pro T-DNA ... 8196 bp Expression vector pBI121_pro QL-ELE-00-006 180 bp View
NRN_HC473825 nrnl1 Sequence 34 from Patent WO201002588... 10904 bp unidentified QL-ELE-00-006 180 bp View
NRN_CQ887765 nrnl1 Sequence 46 from Patent WO200406335... 21300 bp unidentified QL-ELE-00-006 180 bp View
AY804024.1 nt Binary vector pGA643, complete sequ... 11601 bp Binary vector pGA643 QL-ELE-00-006 180 bp View
NRN_HC473825 nrnl1 Sequence 34 from Patent WO201002588... 10904 bp unidentified QL-ELE-00-006 180 bp View
NRN_FB675932 nrnl1 Sequence 2 from Patent WO2007122086... 11051 bp unidentified QL-ELE-00-006 180 bp View
AM295157.1 nt Cloning vector pGWLuc 7979 bp Cloning vector pGWLuc QL-ELE-00-006 180 bp View
AM295157.1 nt Cloning vector pGWLuc 7979 bp Cloning vector pGWLuc QL-ELE-00-006 180 bp View
EF515874.1 nt Gateway binary vector pKPFWG2, comp... 11539 bp Gateway binary vector pKPFWG2 QL-ELE-00-006 180 bp View
NRN_GZ245810 nrnl1 Sequence 249 from patent US 8153859... 9122 bp unidentified QL-ELE-00-006 180 bp View
DQ869004.1 nt Binary vector pMOA33, partial sequence. 2010 bp Binary vector pMOA33 QL-ELE-00-006 180 bp View
NRN_CS592826 nrnl1 Sequence 54 from Patent WO2007039454. 11855 bp unidentified QL-ELE-00-006 180 bp View
DQ869005.1 nt Binary vector pMOA34, partial sequence. 2288 bp Binary vector pMOA34 QL-ELE-00-006 180 bp View
NRN_GZ452783 nrnl1 Sequence 3 from patent US 8232456. ... 14405 bp unidentified QL-ELE-00-006 180 bp View
AB697057.1 nt Moss transformation vector pGUS-NPT... 7114 bp Moss transformation vector pGUS-NPTII-2 QL-ELE-00-006 180 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.