European Commission logo
Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 180 bp 
1     gaatcctgtt gccggtcttg cgatgattat catataattt ctgttgaatt
51    acgttaagca tgtaataatt aacatgtaat gcatgacgtt atttatgaga
101   tgggttttta tgattagagt cccgcaatta tacatttaat acgcgataga
151   aaacaaaata tagcgcgcaa actaggataa

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
LT724926.1 nt Gateway expression vector pAGRIKOLA... 9573 bp Gateway expression vector pAGRIKOLA-CATMA2a00615 QL-ELE-00-007 180 bp View
AB626672.1 nt Gateway vector pUGW15 DNA, complete... 6114 bp Gateway vector pUGW15 QL-ELE-00-007 180 bp View
NRN_JA470507 nrnl1 Sequence 50 from Patent WO2011079005. 14692 bp unidentified QL-ELE-00-007 180 bp View
KP171162.1 nt Binary vector pYBA-1332, complete s... 6323 bp Binary vector pYBA-1332 QL-ELE-00-007 180 bp View
JX280943.1 nt Binary vector pRED-PT4exp, complete... 12675 bp Binary vector pRED-PT4exp QL-ELE-00-007 180 bp View
NRN_JA515158 nrnl1 Sequence 32 from Patent WO2011112945. 17675 bp unidentified QL-ELE-00-007 180 bp View
NRN_JA515158 nrnl1 Sequence 32 from Patent WO2011112945. 17675 bp unidentified QL-ELE-00-007 180 bp View
AB626673.1 nt Gateway vector pUGW17 DNA, complete... 6181 bp Gateway vector pUGW17 QL-ELE-00-007 180 bp View
NRN_JA470513 nrnl1 Sequence 56 from Patent WO2011079005. 16257 bp unidentified QL-ELE-00-007 180 bp View
AB626674.1 nt Gateway vector pUGW18 DNA, complete... 6165 bp Gateway vector pUGW18 QL-ELE-00-007 180 bp View
NRN_JA470590 nrnl1 Sequence 133 from Patent WO2011079005. 12223 bp unidentified QL-ELE-00-007 180 bp View
KM507051.1 nt Binary vector pDOE-10, complete seq... 11592 bp Binary vector pDOE-10 QL-ELE-00-007 180 bp View
AB626675.1 nt Gateway vector pUGW20 DNA, complete... 6412 bp Gateway vector pUGW20 QL-ELE-00-007 180 bp View
NRN_JA470529 nrnl1 Sequence 72 from Patent WO2011079005. 22863 bp unidentified QL-ELE-00-007 180 bp View
LC057493.1 nt Binary vector pMpGWB214 DNA, comple... 12456 bp Binary vector pMpGWB214 QL-ELE-00-007 180 bp View
NRN_JA643502 nrnl1 Sequence 64 from Patent EP2385129. 2191 bp unidentified QL-ELE-00-007 180 bp View
KF018690.1 nt Ti plasmid binary vector pGH00.0126... 15608 bp Ti plasmid binary vector pGH00.0126 QL-ELE-00-007 180 bp View
NRN_JA470570 nrnl1 Sequence 113 from Patent WO2011079005. 10763 bp unidentified QL-ELE-00-007 180 bp View
AB626676.1 nt Gateway vector pUGW21 DNA, complete... 6399 bp Gateway vector pUGW21 QL-ELE-00-007 180 bp View
KF148031.1 nt Ti binary plasmid pGH00.0131, compl... 18018 bp Ti binary plasmid pGH00.0131 QL-ELE-00-007 180 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.