Amplicon details

Amplicon:

180 bp
1     gaatcctgtt gccggtcttg cgatgattat catataattt ctgttgaatt
51    acgttaagca tgtaataatt aacatgtaat gcatgacgtt atttatgaga
101   tgggttttta tgattagagt cccgcaatta tacatttaat acgcgataga
151   aaacaaaata tagcgcgcaa actaggataa  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
U09365.1 nt Binary vector Bin19, complete sequence. 11777 bp Binary vector Bin19 QL-ELE-00-006 180 bp View
NRN_HI006469 nrnl1 Sequence 9 from Patent EP1827078. 9215 bp unidentified QL-ELE-00-006 180 bp View
MH373676.1 nt Protoplast BiFC Vector pRTVnVC, com... 5778 bp Protoplast BiFC Vector pRTVnVC QL-ELE-00-006 180 bp View
DQ005462.1 nt Cloning vector pSAT2A-nosP-MCS-nosT... 3289 bp Cloning vector pSAT2A-nosP-MCS-nosT QL-ELE-00-006 180 bp View
NRN_HD068484 nrnl1 Sequence 11 from Patent WO2010069950. 14927 bp unidentified QL-ELE-00-006 180 bp View
DQ005463.1 nt Cloning vector pSAT2-nosP-MCS-nosT,... 3295 bp Cloning vector pSAT2-nosP-MCS-nosT QL-ELE-00-006 180 bp View
NRN_HD068484 nrnl1 Sequence 11 from Patent WO2010069950. 14927 bp unidentified QL-ELE-00-006 180 bp View
AY297842.1 nt Transformation vector pgR107, compl... 10436 bp Transformation vector pgR107 QL-ELE-00-006 180 bp View
NRN_DL470955 nrnl1 COMPOSITIONS AND METHODS FOR MODULA... 13383 bp unidentified QL-ELE-00-006 180 bp View
AB294481.1 nt Gateway binary vector pGWB514 DNA, ... 12126 bp Gateway binary vector pGWB514 QL-ELE-00-006 180 bp View
AF406991.1 nt Tobacco rattle virus RNA2-based VIG... 9663 bp Tobacco rattle virus RNA2-based VIGS vector pTRV2 QL-ELE-00-006 180 bp View
NRN_GZ534881 nrnl1 Sequence 3 from patent US 8293533. ... 8553 bp unidentified QL-ELE-00-006 180 bp View
AY436765.1 nt Binary vector pAMPAT-MCS, complete ... 5274 bp Binary vector pAMPAT-MCS QL-ELE-00-006 180 bp View
NRN_DL470955 nrnl1 COMPOSITIONS AND METHODS FOR MODULA... 13383 bp unidentified QL-ELE-00-006 180 bp View
AY373338.1 nt Binary vector pGA1611, complete seq... 13476 bp Binary vector pGA1611 QL-ELE-00-006 180 bp View
NRN_HI578415 nrnl1 Sequence 31 from Patent WO2010114989. 11721 bp unidentified QL-ELE-00-006 180 bp View
AY452736.2 nt Reporter vector pUbiGUSPlus, comple... 7018 bp Reporter vector pUbiGUSPlus QL-ELE-00-006 180 bp View
DQ645631.1 nt Plant transformation vector pCre, c... 12358 bp Plant transformation vector pCre QL-ELE-00-006 180 bp View
AY529717.1 nt Cloning vector pADIS1, complete seq... 5106 bp Cloning vector pADIS1 QL-ELE-00-006 180 bp View
MT024581.1 nt Binary vector pRATIO1131, complete ... 13200 bp Binary vector pRATIO1131 QL-ELE-00-006 180 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.